CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadI PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 57/184 (30.98%), Postives = 94/184 (51.09%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALNS (3-ketoacyl-CoA thiolase OS=Salmonella newport (strain SL254) GN=fadI PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 57/184 (30.98%), Postives = 94/184 (51.09%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 59/187 (31.55%), Postives = 92/187 (49.20%), Query Frame = -2 Query: 199 DPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 705 D A KLRP F G+VTA N++ ++DGA+AL+L+S + LG I I YA AA E P+ A P A+ AG++ + E++EAFA ALAN K+ ++ K NV GG++A GHP +GAR++ + L+++ +A+++E+ Sbjct: 249 DLASYAKLRPVFDRKHGSVTAANSTPLTDGASALLLMSEGRAKALGYTPIGYIKSYAFAAIDVWEDMLMGPSYATPMALKRAGMQLEDLTLIEMHEAFAAQALANMKMFASKKFAEEKLGQNRAIGEIDMSKFNVLGGSLAYGHPFAATGARLITQMCNELKRRGGGVGLTTACAAGGLGAAMILEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRTYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGCAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALPB (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A+++++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALEP (3-ketoacyl-CoA thiolase OS=Salmonella enteritidis PT4 (strain P125109) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A+++++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALDC (3-ketoacyl-CoA thiolase OS=Salmonella dublin (strain CT_02021853) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A+++++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALA4 (3-ketoacyl-CoA thiolase OS=Salmonella agona (strain SL483) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A+++++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |