CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadI PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA A++L+ + +LG++++ I GYA +A E P+ A K + + GL S + +++EAFA ALAN K+ ++ DK NV GG++A GHP +GAR++ L L+++ +A+++E+ Sbjct: 254 KLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIRGYAFSAIGVESDMLMGPSYATSKVLQSTGLALSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAMGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadI PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA A++L+ + +LG++++ I GYA +A E P+ A K + + GL S + +++EAFA ALAN K+ ++ DK NV GG++A GHP +GAR++ L L+++ +A+++E+ Sbjct: 254 KLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIRGYAFSAIGVESDMLMGPSYATSKVLQSTGLALSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAMGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECO81 (3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (strain ED1a) GN=fadI PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLYELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECO55 (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain 55989 / EAEC) GN=fadI PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L L ++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELHRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEWM (3-ketoacyl-CoA thiolase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.543e-18 Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F GTVTA ++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA ALAN K+ ++ +K NV GG++A GHP +GAR++ + L+++ +A++VE+ Sbjct: 255 KLRPAFDRKHGTVTAATSTPLTDGASAILLMSESRAKALGYNPIGYIKSYAFSAIDVWEDMLMGPSYATPIALKRAGMELEDLTLIEMHEAFAAQALANMKMFASKKFAQEKLGRNRAIGEIDMNKFNVLGGSLAYGHPFAATGARLITQVCNELKRRGGGTGLTTACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 56/184 (30.43%), Postives = 93/184 (50.54%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A +LRP+F GTVTA N++ ++DGA A+++++ + +LGL + + YA A + PA + P A+ AGL + + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYARLRPAFDRKHGTVTAANSTPLTDGAAAVIMMTESRAKELGLTPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALDRAGLTLADLTLIDMHEAFAAQTLANVQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadI PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ G ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDRKHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCNELKRR 412
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 59/189 (31.22%), Postives = 93/189 (49.21%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GA ++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |