CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadI PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17 Identity = 58/181 (32.04%), Postives = 93/181 (51.38%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKL----------LGLNP-------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 +LRP+F GTVTA N++ ++DGA A++++S + LGL + + YA +A + PA A P A++ AG++ + + +++EAFA LAN KL LG N K NV GG++A GHP +GAR++ L LR++ +A+V+E+ Sbjct: 255 RLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESRAKSLGLTPLGYLRSYAFSAIGVQRDMLLGPAYASPLALARAGVKLADLTLIDMHEAFAAQTLANLKLFASDEFARHQLGRNAALGEVDRAKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMVLEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA A++L+ K +LGL+++ I YA AA E P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L L+++ +A+++E+ Sbjct: 254 KLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAIGVEKDMLMGPSYATPIALDRAGITLNDLTLIDMHEAFAAQTLANLKMFASDKFAQEQLGRAQAIGEVDMSKFNVLGGSLAYGHPFAATGARMITQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadI PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA A++L+ K +LGL+++ I YA AA E P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L L+++ +A+++E+ Sbjct: 254 KLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAIGVEKDMLMGPSYATPIALDRAGITLNDLTLIDMHEAFAAQTLANLKMFASDKFAQEQLGRAQAIGEVDMSKFNVLGGSLAYGHPFAATGARMITQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRPIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRR 412
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = -2 Query: 199 DPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 705 D + KLRP+F + G+VTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 249 DLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = -2 Query: 199 DPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 705 D + KLRP+F + G+VTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 249 DLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = -2 Query: 199 DPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 705 D + KLRP+F + G+VTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 249 DLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAINVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRR 412
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRR 412
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRR 412 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |