CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRR 412
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = -2 Query: 268 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 687 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRR 412
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHESH (3-ketoacyl-CoA thiolase OS=Shewanella sediminis (strain HAW-EB3) GN=fadI PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F GTVTA ++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA LAN ++ G ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 255 KLRPAFDRKHGTVTAATSTPLTDGASAVLLMSESRAKALGYDPIGYIKSYAFSAIDVWEDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAAEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEPW (3-ketoacyl-CoA thiolase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadI PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA LAN ++ G ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 255 KLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWEDMLMGPSYATPMALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 51/181 (28.18%), Postives = 91/181 (50.28%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 +LRP+F GTVTA N++ ++DGA A++L++ + +LG+ + + YA A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ ++ NV GG++A GHP +GAR++ L LR++ +A+V+E+ Sbjct: 255 RLRPAFDRRHGTVTAANSTPLTDGAAAVILMTASRARELGIAPLGFLRSYAFSAIDVRQDMLLGPSYASPLALDRAGITLADLSLIDMHEAFAAQTLANLKMFADERFAREVLDRPRALGEVDMERFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLVTACAAGGLGAAMVLEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadI PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = -2 Query: 202 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 687 KL+P F GTVTA ++ ++DG A++L+ + +LG + + I + AA + P+ A P A+ AG+ + +D E++EAFA ALAN K+ G ++ DK NV GG++A GHP +GAR++ L L ++ +A++VE Sbjct: 254 KLKPVFDRKHGTVTAATSTPLTDGGAAILLMREGRAKELGYKPLGYIRSFGFAAIDVWQDMLMGPSYATPIALQRAGMNLADLDLIEMHEAFAAQALANMKMFGSTKFAQEQLGRDKAIGDIDMDKFNVMGGSLAYGHPFAATGARLITQTLNELNRRGGGVGLTTACAAGGLGAAMIVE 433
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEPA (3-ketoacyl-CoA thiolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadI PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17 Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA LAN ++ G ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 255 KLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWEDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLVTQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_YERPY (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadI PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 53/185 (28.65%), Postives = 91/185 (49.19%), Query Frame = -2 Query: 199 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 699 A+ KLRP+F G+VTA N++ ++DGA A++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR++ +A+++E+ Sbjct: 251 AQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 53/185 (28.65%), Postives = 91/185 (49.19%), Query Frame = -2 Query: 199 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 699 A+ KLRP+F G+VTA N++ ++DGA A++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR++ +A+++E+ Sbjct: 251 AQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 53/185 (28.65%), Postives = 91/185 (49.19%), Query Frame = -2 Query: 199 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 699 A+ KLRP+F G+VTA N++ ++DGA A++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR++ +A+++E+ Sbjct: 251 AQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |