CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16 Identity = 53/181 (29.28%), Postives = 89/181 (49.17%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA+A++L+S + LG + I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 255 KLRPAFDRKHGSVTAANSTPLTDGASAVLLMSESRAKALGYEPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAKEKLGRDRAIGEIDMTKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadI PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = -2 Query: 202 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 687 KLRP F + GTVTA NA+ ++DGA+A+++++ + LG + I YA AA E P+ A P A+ AG+ + + E++EAFA LAN K+ ++ K NV G ++A GHP +G R++ +L L ++ A+A++VE Sbjct: 255 KLRPVFDKKHGTVTAANATPLTDGASAVLMMTESRAKALGYTPLGYIKSYAFAAIDVWEDMLMGPSYATPMALDRAGMTLNDLTLIEMHEAFAAQTLANIKMFASDKFAQEKLGRSKATGEIDMAKFNVMGSSLAYGHPFAATGTRMITQMLNELNRRGGGSGLLTACAAGGLAAAMIVE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHEHH (3-ketoacyl-CoA thiolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadI PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = -2 Query: 199 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVEL 687 KLRP+F G+VTA N++ ++DGA+A++L+S + LG I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L+++ +A++VE+ Sbjct: 255 KLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLVTQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAES (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=vraB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15 Identity = 45/141 (31.91%), Postives = 74/141 (52.48%), Query Frame = -2 Query: 271 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693 L +L+P E GTVT GN+ +DGA L+++ + +LG K A P+ P A+ + ++ L + ++ E+NEAF+ +A+Q+ L + +K+N GGA+A GHP G SGA ++ L + Q Sbjct: 219 LGRLKPLLNE--GTVTVGNSCKKNDGAVLLIVMEENRARQLGFTEGIKFVNSATVGVQPQYLGVGPVPAVNQLLAQERLTINDINAVELNEAFSSQVIASQQQLNIPLNKLNCWGGAIATGHPYGASGAALVTRLFYMKHQ 357
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAEQ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=vraB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 45/141 (31.91%), Postives = 74/141 (52.48%), Query Frame = -2 Query: 271 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693 L +L+P E GTVT GN+ +DGA L+++ + +LG K A P+ P A+ + ++ L + ++ E+NEAF+ +A+Q+ L + +K+N GGA+A GHP G SGA ++ L + Q Sbjct: 219 LGRLKPLLNE--GTVTVGNSCMKNDGAVLLIVMEENRARQLGFTEGIKFVNSATVGVQPQYLGVGPVPAVNQLLARERLTINDINAVELNEAFSSQVIASQQQLNIPLNKLNCWGGAIATGHPYGASGAALVTRLFYMKHQ 357
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAHJ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus haemolyticus (strain JCSC1435) GN=vraB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14 Identity = 48/148 (32.43%), Postives = 72/148 (48.65%), Query Frame = -2 Query: 256 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 699 A+L +LRP GTVT GN+ +DGA +++ E + +G++ P + P A+ + + L + E+NEAF+ LA+ L L DKVN GGA+A GHP SGA ++ LL + NW+Y Sbjct: 217 ARLHRLRPILPN--GTVTVGNSCMKNDGAGIALIMEKEMAVAMGIKWGMLYRDAVTTGVDPTLLGIGPVPAVSQLLKRQKLNIEDISAIELNEAFSSQVLASINELHLGLDKVNQWGGAIATGHPYSASGAALVARLLNL---PNWQY 359
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAAW (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MW2) GN=vraB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = -2 Query: 289 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 687 + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 221 RFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAAS (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MSSA476) GN=vraB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = -2 Query: 289 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 687 + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 221 RFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAAR (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MRSA252) GN=vraB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = -2 Query: 289 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 687 + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 221 RFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFDHGLLFKDGVTVGVDSNLPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: VRAB_STAAN (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain N315) GN=vraB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = -2 Query: 289 KLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 687 + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 221 RFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |