CB304629

Overview
NameCB304629
Unique NameCB304629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            KL +LRP+FK++G TVTAGNAS I+DGA  ++++S +K  +L ++ +A + G+      P +   AP  A+ KA+  +  E S +D +E+NEAFA  +LA  + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL  L  +
Sbjct:  228 KLSRLRPAFKKDG-TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            KL +LRP+FK++G TVTAGNAS I+DGA  ++++S +K  +L ++ +A + G+      P +   AP  A+ KA+  +  E S +D +E+NEAFA  +LA  + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL  L  +
Sbjct:  228 KLSRLRPAFKKDG-TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAA3 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0355 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            KL +LRP+FK++G TVTAGNAS I+DGA  ++++S +K  +L ++ +A + G+      P +   AP  A+ KA+  +  E S +D +E+NEAFA  +LA  + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL  L  +
Sbjct:  228 KLSRLRPAFKKDG-TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.783e-30
Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = -2
Query:  271 LRKLRPSFKENG-GTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693
            + KL+P F  +G GTVT  NAS I+DGA A+VL+   +  K GL  +A+I  ++     P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGLNP+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  231 MSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            KL +LRP+FK++G TVTAGNAS I+DGA  ++++S +K  +L ++ +A + G+      P +   AP  A+ KA+  +  E S +D +E+NEAFA  +LA  + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL  L  +
Sbjct:  228 KLSRLRPAFKKDG-TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPAIMGIAPVDAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 69/146 (47.26%), Postives = 100/146 (68.49%), Query Frame = -2
Query:  259 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWK 696
            KL KLRP+FK++G TVTAGNAS I+DGA  LV+++ EK  +LG++ +A I  Y  A   P++    P  A  KA+  A +    +D  E NEAFA  ++A  + L ++ +KVNV+GGA+A+GHP+GCSGARIL TLL  +++++ K
Sbjct:  227 KLAKLRPAFKKDG-TVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAK 371          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = -2
Query:  256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693
            L +LRP F    GTVTAG +S++SDGA+A++++S EK  +LGL++ A+I G A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++  K+ KY
Sbjct:  223 LSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGLKIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLAIEDMDVVELNEAFAAQSLPCAKDLGLLEVMDEKVNLNGGAIALGHPLGCSGARISTTLINLMEAKDAKY 371          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = -2
Query:  268 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVAL---ANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 693
            L +LRP+F    GTVTAG +S ++DGA+A++L+S E+   LGL  +AKI   A A   P +    P  A  KA+  AGL+   +D +E+NEAFA  +L    + KL+G+   KVN++GGA+ALGHPLGCSGARI  TLL V+  K
Sbjct:  223 LAQLRPAFDPKSGTVTAGQSSQLTDGASAMLLMSAERAQALGLTPMAKIRSMATAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAAQSLPVIKDLKLMGVVDQKVNLNGGAIALGHPLGCSGARISTTLLNVMAAK 367          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAAN (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0342 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30
Identity = 68/143 (47.55%), Postives = 97/143 (67.83%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            KL +LRP+FK++G TVTAGNAS I+DGA  ++++S +K  +L ++ +A + G+      P +   AP  A+ KA+  +  E S +D +E+NEAFA   LA  + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL  L  +
Sbjct:  228 KLSRLRPAFKKDG-TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQLLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAAM (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0354 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30
Identity = 68/143 (47.55%), Postives = 97/143 (67.83%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            KL +LRP+FK++G TVTAGNAS I+DGA  ++++S +K  +L ++ +A + G+      P +   AP  A+ KA+  +  E S +D +E+NEAFA   LA  + L L P+KVNV GGA+ALGHP+G SGAR+LVTLL  L  +
Sbjct:  228 KLSRLRPAFKKDG-TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQLLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDE 369          
The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THLA_STAAB3.783e-3047.55Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA83.783e-3047.55Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA33.783e-3047.55Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THIC_HUMAN3.783e-3050.00Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
THLA_STAAR4.941e-3047.55Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_CLOD64.941e-3047.26Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
FADA_VIBPA4.941e-3048.323-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]
FADA_HAHCH4.941e-3048.283-ketoacyl-CoA thiolase OS=Hahella chejuensis (str... [more]
THLA_STAAN6.453e-3047.55Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAM6.453e-3047.55Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGCAAAGCCAGCCAGATA
ATTATTATCTTTTTATTGAAGACGAAAGCACATATGAATAAGAAATGGAG
ATACAATTGCACAACACCCCACCCAAATGGGCCATAATTATCCTCCACAA
GAAGGGTGCAACCTCGTTGATAATAATCCGAACAGAAAATGCTTACACAA
GCTCTACAACAAGTGCCGATGCACCTCCTCCTCCGTTGCAAACGCCACCA
ACACCGTATTTCCAGTTTTTCTGCCTAAGTACCCCCAAAAGTGTGACCAA
GATACGAGCTCCGCTGCAGCCCAGAGGATGTCCCAAAGCTACTGCTCCAC
CATGGACATTAACCTTGTCAGGATTTAGTCCAAGCAATTTCTGGTTTGCA
AGGGCGACGACAGCAAAGGCCTCATTTATTTCGTAACAGTCAACTTGAGA
AGCCTCCAAGCCAGCATTTGAAATGGCTTTAGGTATGGCTAGGGCTGGAG
CTGTTGTAAACATCTCTGGTGCCTGAGCAGCATCAGCATATCCTGTGATC
TTGGCGATCACTTGCAAACCCAGCTTAAGTACCTTCTCTCCACTGACTAG
AACTAATGCTGTAGCTCCATCACTTATACTAGAGGCATTGCCAGCCGTAA
CAGTTCCTCCATTCTCCTTGAAACTTGGTCGAAGCTTCCTCAATTTTGCC
GGGTCAAACTTGCCTAAA
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