CB304629

Overview
NameCB304629
Unique NameCB304629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13509 contig Csv1_Contig13509:1..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.452e-29
Identity = 69/145 (47.59%), Postives = 98/145 (67.59%), Query Frame = -2
Query:  259 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWK 693
            L KL+P+F+++G +VTAGNASS++DGA A++L+S  K   LGL V+A+I  YA A   P +    P  A  +A+  AG    Q+D  E NEAFA  +LA  + LG +  +VNV+GGA+ALGHP+G SG R+LVTLL  + +++ K
Sbjct:  229 LAKLKPAFRKDG-SVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLARIASYASAGVDPAIMGIGPVSATRRALDKAGWSLEQLDLIEANEAFAAQSLAVGRELGWDAARVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAK 372          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 72/164 (43.90%), Postives = 103/164 (62.80%), Query Frame = -2
Query:  202 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 693
            L KL+P+FK++G TVTAGNAS ++D A  LV++S EK  +LG++ +AKI  Y  A   P +    P  A   AI  AG    ++D  E NEAFA  +LA  K L  + +KVNV+GGA+ALGHP+G SGARILVTL+  +++++ K             +A+++E
Sbjct:  228 LAKLKPAFKKDG-TVTAGNASGLNDCAAVLVIMSAEKAKELGVKPLAKIVSYGSAGVDPAIMGYGPFYATKAAIEKAGWTVDELDLIESNEAFAAQSLAVAKDLKFDMNKVNVNGGAIALGHPIGASGARILVTLVHAMQKRDAKKGLATLCIGGGQGTAILLE 390          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29
Identity = 69/140 (49.29%), Postives = 92/140 (65.71%), Query Frame = -2
Query:  271 KLRPSFKENG-GTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 687
            KL+P F  +G GTVT  NAS ++DGA A+VL+   +  +  L+ +A+I  ++ A   P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGLNP+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  233 KLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAERRMLKPLARIVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLFEINEAFAAVSAAIAKELGLNPEKVNIDGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = -2
Query:  271 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693
            L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  + +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSIADIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = -2
Query:  271 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693
            L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  + +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = -2
Query:  256 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 699
            A L +LRP F    GTVTAG +S++SDGA+A++++S +K   LGL + A+I   A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     DKVN++GGA+ALGHPLGCSG RI  TL+ ++  K+ KY
Sbjct:  217 AGLAELRPVFDPANGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALQRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLEMMDDKVNLNGGAIALGHPLGCSGTRISTTLINLMEAKDAKY 367          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 71/151 (47.02%), Postives = 95/151 (62.91%), Query Frame = -2
Query:  256 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 699
            A L +LRP F    GTVTAG +S++SDGA+A++++S +K   LGL + A+I   A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     DKVN++GGA+ALGHPLGCSG RI  TL+ ++  K+ KY
Sbjct:  217 AGLAELRPVFDPANGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALKRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLDMMDDKVNLNGGAIALGHPLGCSGTRISTTLINLMEAKDAKY 367          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = -2
Query:  271 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693
            L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  + +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  223 LAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 64/143 (44.76%), Postives = 94/143 (65.73%), Query Frame = -2
Query:  268 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 696
            +L KL P +  +G ++TAGNA  ++DGA A VL+S EK  +LG + +A I G++           AP  AI K +   GL    +D +E+NEAFA V L  +K++G + +KVNV+GGA+ALGHP+G SGARIL+TL+  L+++
Sbjct:  228 QLAKLAPIYASDG-SITAGNAPGVNDGAGAFVLMSEEKAAELGKRPLATILGFSTTGMPAHELAAAPGFAINKLLKKNGLTVQDIDLFEVNEAFASVVLTCEKIVGFDLEKVNVNGGAIALGHPIGASGARILMTLVYELKRR 369          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THLA_STAES (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2384 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 67/137 (48.91%), Postives = 95/137 (69.34%), Query Frame = -2
Query:  286 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 696
            KL +LRP+FK++G +VTAGNAS I+DGA A+++++ +K   LGLQ IA +  +  +  AP +    P  AI KA+  +    + VD +E+NEAFA  ++A  + L L  DKVNV+GGA+ALGHP+G SGAR LV+LL
Sbjct:  228 KLAQLRPAFKKDG-SVTAGNASGINDGAAAMLVMTEDKAKALGLQPIAVLDSFGASGVAPSIMGIGPVEAIHKALKRSNKVINDVDIFELNEAFAAQSIAVNRELQLPQDKVNVNGGAIALGHPIGASGARTLVSLL 363          
The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
ATOB_PSEAE2.452e-2947.59Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]
THLA_CLOAB3.202e-2943.90Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
THIC_MOUSE4.182e-2949.29Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
FADA_PSEU27.134e-2946.533-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PSEPF9.318e-2946.533-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_VIBCH1.217e-2847.023-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA... [more]
FADA_VIBC31.217e-2847.023-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADA_PSEF51.217e-2846.533-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
THL_BACSU1.589e-2844.76Acetyl-CoA acetyltransferase OS=Bacillus subtilis ... [more]
THLA_STAES1.589e-2848.91Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGCAAAGCCAGCCAGATA
ATTATTATCTTTTTATTGAAGACGAAAGCACATATGAATAAGAAATGGAG
ATACAATTGCACAACACCCCACCCAAATGGGCCATAATTATCCTCCACAA
GAAGGGTGCAACCTCGTTGATAATAATCCGAACAGAAAATGCTTACACAA
GCTCTACAACAAGTGCCGATGCACCTCCTCCTCCGTTGCAAACGCCACCA
ACACCGTATTTCCAGTTTTTCTGCCTAAGTACCCCCAAAAGTGTGACCAA
GATACGAGCTCCGCTGCAGCCCAGAGGATGTCCCAAAGCTACTGCTCCAC
CATGGACATTAACCTTGTCAGGATTTAGTCCAAGCAATTTCTGGTTTGCA
AGGGCGACGACAGCAAAGGCCTCATTTATTTCGTAACAGTCAACTTGAGA
AGCCTCCAAGCCAGCATTTGAAATGGCTTTAGGTATGGCTAGGGCTGGAG
CTGTTGTAAACATCTCTGGTGCCTGAGCAGCATCAGCATATCCTGTGATC
TTGGCGATCACTTGCAAACCCAGCTTAAGTACCTTCTCTCCACTGACTAG
AACTAATGCTGTAGCTCCATCACTTATACTAGAGGCATTGCCAGCCGTAA
CAGTTCCTCCATTCTCCTTGAAACTTGGTCGAAGCTTCCTCAATTTTGCC
GGGTCAAACTTGCCTAAA
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