CB304662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.330e-25 Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 255 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 530 AITCGQV ++ PC+ + R GG P CC+GVRSL AA T+ DR+ ACNCLK A R I G+NA AA +P +CGVS+PY IS + DCSRV Sbjct: 25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.330e-25 Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = -1 Query: 255 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 530 AITCGQV ++ PC+ + R GG P CC+GVRSL AA T+ DR+ ACNCLK A R I G+NA AA +P +CGVS+PY IS + DCSRV Sbjct: 25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.330e-25 Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 255 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 530 AI+CGQV +++PC+++ R GG P CC+GVRSLN AA T+ DR+ ACNCLK SI G+NA AA +P +CGVSIPY ISP+ DCS V Sbjct: 26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 6.330e-25 Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 255 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 530 AI+CGQV +++PC+++ R GG P CC+GVRSLN AA T+ DR+ ACNCLK SI G+NA AA +P +CGVSIPY ISP+ DCS V Sbjct: 27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.268e-25 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = -1 Query: 252 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINAN--VAAGLPRQCGVSIPYKISPNTDCSRVR 530 A++CGQV +L PCI ++ GG P CC GVRSL A+T+ DRQ+ CNCLKQA IP NAN +AAGLP +CGV+IPYKISP+TDC ++ Sbjct: 30 AVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.080e-24 Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = -1 Query: 255 VTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 551 + AP +A+TCGQV LAPCI + P CC+GVR+LN AA T+ DRQ C CLKQ ++ G+ ++ AG+P +CGV+IPY ISP+TDCSRV Sbjct: 20 LAAPAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.842e-24 Identity = 53/103 (51.46%), Postives = 75/103 (72.82%), Query Frame = -1 Query: 252 VTAPVTN--AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSI-PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 551 V P+T+ A++CG V +LA CI ++ GG PP CC+GV++LN A+T+PDRQ ACNC++ A R++ G+NA AAG+P+ CGV+IPYKIS +T+C VR Sbjct: 17 VAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.406e-24 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = -1 Query: 252 VTAPVTN--AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 551 V P+T+ A++CG V+G +APCI +L P CC+GV SLN ART+PDRQ AC CL A ++P IN AAGLP+ CGV+IPYKIS T+C+ V+ Sbjct: 17 VAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.406e-24 Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = -1 Query: 252 VTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 551 V AP A+TCGQVT +LAPC+ +L G P CC GV+ L G A+T+ DRQ AC CLK A S G++ AA LP C V+IPYKISP+TDCS+V+ Sbjct: 17 VVAPHAEALTCGQVTSTLAPCLPYLMNRG--PLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CB304662 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24 Identity = 55/102 (53.92%), Postives = 70/102 (68.63%), Query Frame = -1 Query: 252 VTAPVTN--AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTSPDRQAACNCLKQAHRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 551 V P+T+ A++CG V+G +APCI +L G P CC GV +LN ART+PDRQ AC CL A S P +NA AAGLP+ CGV+IPYKIS +T+C+ VR Sbjct: 17 VAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117 The following BLAST results are available for this feature:
BLAST of CB304662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304662 ID=CB304662; Name=CB304662; organism=Citrus sinensis; type=EST; length=551bpback to top |