CB304675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A2_HUMAN (Eukaryotic translation initiation factor 5A-2 OS=Homo sapiens GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.972e-20 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R DYQLI I +DG++SLLTETG ++DL+LP E L +I+ + G+D+ V+VM +M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A2_CHICK (Eukaryotic translation initiation factor 5A-2 OS=Gallus gallus GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 8.849e-20 Identity = 49/94 (52.13%), Postives = 70/94 (74.47%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIFNGKK EDI PS+HN D P++ R DYQLI I +DG++SLLTE+G ++DL+LP + +L +I+ F +D+ ++V+S+M EE A+K Sbjct: 59 VGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGI-QDGYLSLLTESGEVREDLKLP-EGDLGKEIEGKFNANEDVQISVISAMNEECAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 4.392e-19 Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.278e-18 Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.278e-18 Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.278e-18 Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.278e-18 Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.847e-18 Identity = 46/94 (48.94%), Postives = 69/94 (73.40%), Query Frame = -1 Query: 297 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 578 VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G +DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 59 VGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.545e-16 Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 279 VGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 578 V IDIF GKKLED+ PS+HN D P+V RTDYQ I ED F+ L+ G K D+++P E L +I+ EGKD V V ++MGEE +K+ K+ Sbjct: 66 VAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNKD 163
BLAST of CB304675 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16 Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = -1 Query: 297 IDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 572 IDIF GKK E+I PS+HN D P+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + +I EGK+ +V+V+S++G+E + ++K Sbjct: 66 IDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155 The following BLAST results are available for this feature:
BLAST of CB304675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304675 ID=CB304675; Name=CB304675; organism=Citrus sinensis; type=EST; length=578bpback to top |