CB304712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL43_ASHGO (60S ribosomal protein L43 OS=Ashbya gossypii GN=RPL43 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.836e-31 Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 M KRTKK GI GKYG RYG+SLR+Q+KK+EV +H++Y C FCG+ AVKR A GIW C C K AGGAYT +TA+A TVRSTIRRLRE E+ Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKAVKRGAAGIWNCSSCKKTVAGGAYTFSTAAAATVRSTIRRLREMAEA 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_CHICK (60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 6.316e-31 Identity = 62/88 (70.45%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KRKAVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_CAEEL (60S ribosomal protein L37a OS=Caenorhabditis elegans GN=rpl-43 PE=2 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 6.316e-31 Identity = 63/91 (69.23%), Postives = 71/91 (78.02%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGASLRK KK+EV++HS+Y C FCG+ A+KRKA GIW C C KV AGGAY T +A TVRSTIRRLR+ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHKVVAGGAYVYGTVTAATVRSTIRRLRDLKE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_XENLA (60S ribosomal protein L37a OS=Xenopus laevis GN=rpl37a PE=3 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 8.249e-31 Identity = 61/88 (69.32%), Postives = 73/88 (82.95%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTR+GASLRK +KK+E+S+H+KY C FCG+ +KRKAVGIW C C K+ AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRFGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKIVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_RAT (60S ribosomal protein L37a OS=Rattus norvegicus GN=Rpl37a PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.407e-30 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_PONAB (60S ribosomal protein L37a OS=Pongo abelii GN=RPL37A PE=3 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 1.407e-30 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_MOUSE (60S ribosomal protein L37a OS=Mus musculus GN=Rpl37a PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.407e-30 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_HUMAN (60S ribosomal protein L37a OS=Homo sapiens GN=RPL37A PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.407e-30 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_BOVIN (60S ribosomal protein L37a OS=Bos taurus GN=RPL37A PE=3 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 1.407e-30 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KR+AVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_ICTPU (60S ribosomal protein L37a OS=Ictalurus punctatus GN=rpl37a PE=3 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 2.400e-30 Identity = 60/91 (65.93%), Postives = 73/91 (80.22%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGASLRK +KK+E+S+H+KY C FCG+ +KR+AVGIW C C K AGGA+T NT SAVTV+S I+RL+E + Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIKRLKEMKD 91 The following BLAST results are available for this feature:
BLAST of CB304712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304712 ID=CB304712; Name=CB304712; organism=Citrus sinensis; type=EST; length=564bpback to top |