CB304712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_OSTOS (60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a PE=3 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 3.135e-30 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGASLRK +KKME+++HS+Y C FCG+ A++R AVGIW C C K AGGAY T +A TVRST+RRLR+ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVGIWNCSKCKKTVAGGAYVYGTVAAATVRSTVRRLRDLKE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL43_YEAST (60S ribosomal protein L43 OS=Saccharomyces cerevisiae GN=RPL43A PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 5.347e-30 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 M KRTKK GI GKYG RYG+SLR+Q+KK+E+ +H++Y C FCG+ VKR A GIW C C K AGGAYT++TA+A TVRSTIRRLRE E+ Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL43_CANGA (60S ribosomal protein L43 OS=Candida glabrata GN=RPL43 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.984e-30 Identity = 58/92 (63.04%), Postives = 72/92 (78.26%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 M KRTKK GI GKYG RYG+SLR+Q+KK+EV +H++Y C FCG+ V+R A GIW C C K AGGAYT++TA+A TVRSTIRRLR+ E+ Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSCHSCKKTVAGGAYTVSTAAAATVRSTIRRLRDMVEA 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_SCHMA (60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.191e-29 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = -1 Query: 241 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 510 KRTKK GIVGKYG RYGASLRK IKK+E+S+H+KY C FCG+ ++KRKA GIW CK C KV AGGAY +T +A T+R+ IRRLR+ ES Sbjct: 2 KRTKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAGIWECKACKKVVAGGAYVCSTTAATTIRAAIRRLRDAHES 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_DROME (60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.032e-29 Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGASLRK +KKME+++HSKY C FCG+ ++KR VGIW CK C + AGGA+ +T +A +VRS +RRLRE E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVRRLRETKE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL43B_SCHPO (60S ribosomal protein L43-B OS=Schizosaccharomyces pombe GN=rpl43b PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.005e-28 Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGC--KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 MTKRTKK G+ GKYG RYGASLR+ ++K+EV +HS+Y C FCG VKR A GIW C K C K AGGA+T+ TA+A + RSTIRRLRE E Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL43A_SCHPO (60S ribosomal protein L43-A OS=Schizosaccharomyces pombe GN=rpl43a PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.005e-28 Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGC--KDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 MTKRTKK G+ GKYG RYGASLR+ ++K+EV +HS+Y C FCG VKR A GIW C K C KV AGGA+T+ TA+A + RSTIRRLRE E Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGCKKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_MYXGL (60S ribosomal protein L37a (Fragment) OS=Myxine glutinosa GN=rpl37a PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.456e-27 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = -1 Query: 244 GIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 492 GIVGKYGTRYGASLRK +KK+E+++HSKY C FCG+ +KR+AVGIW C C K AGGA+T NT+SAVTV+S IRRLRE + Sbjct: 2 GIVGKYGTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTSSAVTVKSAIRRLREMKD 84
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_PLAF7 (60S ribosomal protein L37a OS=Plasmodium falciparum (isolate 3D7) GN=RPL37A PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.244e-27 Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M++RTKK G+ GKYGTRYG+SLRKQIKK+E+ +H+KY C FCG+ A KR VGIW CK C + GGA++L T +AV +STI RLR+Q E Sbjct: 1 MSRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKCKRKVCGGAWSLTTPAAVAAKSTIIRLRKQKE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37L_HUMAN (Putative 60S ribosomal protein L37a-like OS=Homo sapiens GN=RPL37L PE=5 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = -1 Query: 253 MTKRTKKAG-IVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M K TKK G IV KY T +GASL K +K++E+S+H+KY C FCG+ +KR+AV I C C K AG A+T NT SAV V+S IRRL+E Sbjct: 1 MAKCTKKVGGIVSKYRTHHGASLWKMVKEIEISQHTKYTCSFCGKTKMKRRAVKIRHCNSCMKTVAGSAWTYNTTSAVMVKSAIRRLKE 89 The following BLAST results are available for this feature:
BLAST of CB304712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304712 ID=CB304712; Name=CB304712; organism=Citrus sinensis; type=EST; length=564bpback to top |