CB304712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_METM5 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = -1 Query: 253 TKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 504 TKK G G++G+RYG +R +++ +E+ + +Y C C +KR IW C+ CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRAGTSIWVCEKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_METVS (50S ribosomal protein L37Ae OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.728e-12 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = -1 Query: 253 TKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 504 TKK G G++G RYG +R +++ +E+ ++ +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGPRYGRKIRVRLRDVEIKQNKEYKCPVCAFPKLKRAGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_THESM (50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = -1 Query: 310 RTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAY 507 RTKK G G++G RYG +R+++ +E K+ C CG AV+R + GIW C+ CG AGGAY Sbjct: 3 RTKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_METM7 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = -1 Query: 253 TKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 504 TKK G G++G+RYG +R +++ +E+ + +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_METM6 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = -1 Query: 253 TKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 504 TKK G G++G+RYG +R +++ +E+ + +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_AERPE (50S ribosomal protein L37Ae OS=Aeropyrum pernix GN=rpl37ae PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = -1 Query: 307 RTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEY-AVKRKAVGIWGCKDCGKVKAGGAYT 507 RTK G G+YG RYG S+RK+++ + R+ + C FCG V+R +VG+W C+ CG AG AYT Sbjct: 3 RTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKCGNTWAGAAYT 70
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_THEON (50S ribosomal protein L37Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = -1 Query: 310 RTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAY 507 RT K G G++G RYG +R+++ +E K+ C CG AV+R + GIW C+ CG AGGAY Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_THEGJ (50S ribosomal protein L37Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 30/80 (37.50%), Postives = 44/80 (55.00%), Query Frame = -1 Query: 268 RTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 507 RT K G G++G RYG +R+++ +E K+ C CG AV+R + GIW C+ CG AGGAY T + + + Sbjct: 3 RTVKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVV 82
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_PYRKO (50S ribosomal protein L37Ae OS=Pyrococcus kodakaraensis GN=rpl37ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = -1 Query: 271 RTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNT-ASAVTVRST 507 RT K G G++G RYG +R+++ +E K+ C CG AV+R + GIW C+ CG AGGAY T A V R T Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVT 82
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_THEAC (50S ribosomal protein L37Ae OS=Thermoplasma acidophilum GN=rpl37ae PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = -1 Query: 307 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYT 516 M+KRT K G+ G++G RYG ++RK+ ++ + + Y C C + VKR A GIW C+ CG AGG+YT Sbjct: 1 MSKRTVKVGVAGRFGPRYGVTIRKEWSEIYKQKIALYTCPSCKKKRVKRVANGIWQCRHCGYKFAGGSYT 70 The following BLAST results are available for this feature:
BLAST of CB304712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304712 ID=CB304712; Name=CB304712; organism=Citrus sinensis; type=EST; length=564bpback to top |