CB304715

Overview
NameCB304715
Unique NameCB304715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:1..583. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = -1 
Query:  173 MNQRFCCLIVLFLSVVPLLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQ-SKSALEFESVEKGETQVVSGTNYRLIL-VVKDGPSTKKFEAVVWEK-PWEHFKSLTSSKPM 520
            M  R   L++  ++VV ++A      A VG W+P+ D  + HV E+G++AV E ++  +   L FE V  GE QVV+G NYRL L     G    ++EAVV+E+ P  + + L S +P+
Sbjct:    1 MTMRTSSLLLAAVAVVAIVAGAT--AATVGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPI 116
[Close]
BLAST of CB304715 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 36/93 (38.71%), Postives = 55/93 (59.14%), Query Frame = -1 
Query:  185 AGDRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALEFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTS 460
            A  + G +VGG + I+ +  +  V  + +FAV E+NK     LE++ +   +TQVV+GT + L + V DG + K +EA V EK WE+ K L S
Sbjct:    2 ADQQAGTIVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLES 94
The following BLAST results are available for this feature:
BLAST of CB304715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYT7_ORYSJ7.694e-1136.97Putative cysteine proteinase inhibitor 7 OS=Oryza ... [more]
CYT1_ARATH7.694e-1138.71Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_H02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_H02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304715 ID=CB304715; Name=CB304715; organism=Citrus sinensis; type=EST; length=583bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAAACGGAAAATCGAAATC
TGAAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCACTC
ACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGTTA
TTTGTTAAACACCCTATTTAACCATAGGCTTAGACGAGGTGAGACTCTTG
AAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTCGA
AGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAACCA
CCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTCCAACGCGCTCTTTGAC
TGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGCTT
CTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTTAC
GGTCGCCGGCGGCCAGGAGAGGGACCACGGAGAGAAAGAGAACAATAAGA
CAGCAAAAACGTTGATTCATTTTCGTTGTTTTGGTAACCGTTCACACCAA
AGTCCGTGACTTCCGGTTCTTGAGTGAATCCCC
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