CB304724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.086e-24 Identity = 59/113 (52.21%), Postives = 71/113 (62.83%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN-AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C ++LC+LV AP+ AI+ QV +SL PC+ ++R P PP C G+RSL AAR DRQAAC C+K I I VAA LP QC V IPYKISPS DC RV+ Sbjct: 8 KLACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.086e-24 Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = -1 Query: 251 LLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 568 L+L + + A V AI+CG V SLAPC +L GG PP CC+GV++LN A+TTPDRQ AC C++ +I G+ P++A+ LP +CGV IPY IS S +C ++ Sbjct: 11 LVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.068e-24 Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = -1 Query: 263 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDC 526 +TCGQV +LA CI FL+ GG PP CC+GV+++ ++RTT DR+A C+CLK A G +RGI PN A ALP +CGV IPYKIS S +C Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNC 87
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.925e-24 Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 +LV L+ ++ AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AA +PS CGV +PY IS S DC ++R Sbjct: 8 QLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.766e-23 Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C + C++V P+T+ A++CG V+ +APCI +L P CCSGV SLN ARTTPDRQ AC CL A + I AA LP CGV IPYKIS + +C V+ Sbjct: 6 KLACLIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.766e-23 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 +LV ++ ++ AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AA +PS CGV +PY IS S DC ++R Sbjct: 8 QLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.766e-23 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 +LV ++ ++ AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AA +PS CGV +PY IS S DC ++R Sbjct: 8 QLVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.933e-23 Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 251 KLVC--ALLLCILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPN--VAAALPSQCGVRIPYKISPSPDCFRVR 583 KLVC A++ C+ V P A++CGQV +L PCI ++ GG P CC+GVRSL A+TT DRQ+ CNCLK+A I N +AA LP +CGV IPYKISPS DC ++ Sbjct: 9 KLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.933e-23 Identity = 55/113 (48.67%), Postives = 70/113 (61.95%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C +L C++V P+T+ A++CG V+ +APCI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AA LP CGV IPYKIS S +C VR Sbjct: 6 KLACLVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.137e-23 Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 251 VCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 577 VC LLL + +AITCGQV + L C+ + R GG PP CC+GVR+LN A+TTPDRQ ACNCLK G+ + A +P +CGV IPY I DC +VR Sbjct: 7 VCFLLLLAFLIG-TASAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113 The following BLAST results are available for this feature:
BLAST of CB304724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304724 ID=CB304724; Name=CB304724; organism=Citrus sinensis; type=EST; length=583bpback to top |