CB304724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVT--NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV----AAALPSQCGVRIPYKISPSPDCFRVR 583 KL C +L C++V P+T A+TCG V +++APCI ++ GG P CC+GV LN ARTTPDRQ AC CL+ A R + PN+ AA +P CGV +P+ IS + +C V+ Sbjct: 6 KLACLVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = -1 Query: 254 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 583 +LV ++ ++ AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC CLK +I+GI + +P +CGV +P+ IS S DC +V Sbjct: 8 QLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = -1 Query: 254 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNC-LKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 529 AI+CGQV++++ PC+ + R G P C SGVRSLN AARTT DR+AACNC LK A + G+ A+++P +CGVR+PY IS S DC RV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 55/113 (48.67%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C +L C++V P+ A++CG V+ +LA CI +L G P CCSGV SLN ARTTPDRQ AC CL A + I AA LP CGV IPYKIS + +C V+ Sbjct: 6 KLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.679e-22 Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C +L C++V P+ A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AA LP CGV IPYKIS S +C VR Sbjct: 6 KLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 54/113 (47.79%), Postives = 67/113 (59.29%), Query Frame = -1 Query: 251 KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 583 KL C +L C++V P+ A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + AA LP CGV IPYKIS S +C VR Sbjct: 6 KLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.279e-21 Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 263 LVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDC 580 + C ++L I + +P + I CG VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ AALP+ CGV IPY IS S +C Sbjct: 8 ITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNC 112
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.116e-20 Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = -1 Query: 254 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 526 ++CG V LAPCI +LR+ G P CC+GV++L +A TT DR+ AC CL A +I G+ +AA LP +CGV IPYKISPS +C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA-CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20 Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 254 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 583 KL L+ ++ AITCGQV+++L PC + + G P CCSGV+ L G AR+T D+QA C CLK G + AA +PS+CGV +PY IS S DC ++ Sbjct: 8 KLALVALVAAMLLVAADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.067e-20 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = -1 Query: 251 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 529 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 The following BLAST results are available for this feature:
BLAST of CB304724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304724 ID=CB304724; Name=CB304724; organism=Citrus sinensis; type=EST; length=583bpback to top |