CB304724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 254 LVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 580 + AL+L + AI CG V + + PC+ +++ GG P CC GV++L+ AR+ DRQ+ACNCLK I + + A ++P +CGV +PY IS + DC RV Sbjct: 6 MAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = -1 Query: 263 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDC 526 + CGQV +SLA CIPFL G P CC+GV++L A T+ DR+AAC C+K A IK + A++LP +CGV I IS + +C Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNC 88
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = -1 Query: 254 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 532 +AI+C V L PC+ +L +G PP CC GV+SL A T+ D++AAC C+K ++ +KP +A AL S CG +P SP+ DC V Sbjct: 24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15 Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 251 VCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR--GIKPNVAAALPSQCGVRIPYKISPSPDCFRVR 577 +C LL I AI+C V A+L PC+ ++ GG P CC+G+R L+ A + D+Q C C+K G + I AAALP +CGV++PYKI PS +C ++ Sbjct: 8 LCLLLASIFAWGSEA-AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = -1 Query: 263 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV---AAALPSQCGVRIPYKISPSPDC 529 A++C V A L PC+ ++ GG P CC+G+ +L A+T+ DRQ C C+K A G + + P A LPS+CGV +PYK SPS DC Sbjct: 20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT-LSPRTIQNALELPSKCGVDLPYKFSPSTDC 109
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.693e-14 Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = -1 Query: 254 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVR-IPYKISPSPDCFRV 541 PV AI+C QV +++ PC +L P CC +R L+ + TPDRQA CNCLK G+K AA LP C V + ISP+ DC +V Sbjct: 27 PVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLK-TQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12 Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = -1 Query: 254 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISPSPDCFRV 526 + CGQV +L+ C+PFL P CC+GV L A T D++ AC C+K A I+ + A++LP +CGV I IS + +C + Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.511e-11 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = -1 Query: 275 TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPYKISP 523 TCG V +L PC+PF++ + P CCSG + L+G +T P R AC C++ A T I + + +P CG+ + K+ P Sbjct: 39 TCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGI-VDSKLPP 120
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11 Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = -1 Query: 251 APVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPY-KISPSPDCFRVR 544 AP CG+V + PC+ F++ + P CCSG + L+ +TT ++ AC C+ RA I GIK + A +P +C ++ I+ DC +++ Sbjct: 27 APAPGEEACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLPPITADFDCSKIQ 125
BLAST of CB304724 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11 Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = -1 Query: 254 LVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAALPSQCGVRIPY-KISPSPDCFRV 553 L +AP CG+V + PC+ F++ + P CCSG + L+ +TT ++ AC C+ A I GIK + A +P +CG+ I+ DC ++ Sbjct: 24 LASAPAPGEGPCGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124 The following BLAST results are available for this feature:
BLAST of CB304724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304724 ID=CB304724; Name=CB304724; organism=Citrus sinensis; type=EST; length=583bpback to top |