CB304730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.163e-32 Identity = 61/111 (54.95%), Postives = 87/111 (78.38%), Query Frame = -2 Query: 210 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKK-LPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 539 AEEGQVI CH ++ W QL + KLIV+DFTASWCPPC++++P+ ++L KK + + IF KVDVDEL++VA+E+ VEAMPTFVL K+G V++++VGA+K++L + KH Sbjct: 3 AEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.960e-30 Identity = 57/110 (51.82%), Postives = 82/110 (74.55%), Query Frame = -2 Query: 210 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 539 AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E KK P +FLKVDVDELK VAE++ VEAMPTF+ K+G +++VGA+KD+LQ + KH Sbjct: 3 AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.960e-30 Identity = 57/110 (51.82%), Postives = 82/110 (74.55%), Query Frame = -2 Query: 210 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 539 AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E KK P +FLKVDVDELK VAE++ VEAMPTF+ K+G +++VGA+KD+LQ + KH Sbjct: 3 AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.523e-29 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = -2 Query: 210 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 530 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI EL KK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K+E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.523e-29 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = -2 Query: 210 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 530 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI EL KK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K+E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.244e-28 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = -2 Query: 210 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 530 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI EL KK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K+E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.061e-22 Identity = 51/109 (46.79%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 213 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 539 +E +V+ + W + + KL+VVDF+ASWC PC+++ P + + K V F+K+DVDEL VA+E+ V AMPTFVL K GK +ERI+GAKKDEL+ V K Sbjct: 22 SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = -2 Query: 210 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 530 G VI + +W+ QL KG K IVVDFTA+WC PCK+++P+ L VIFLKVDVD + +VAE + AMPTF + K+G + +VGA +D+L+ V KH Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKH 110
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.524e-18 Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = -2 Query: 219 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAV 530 G V T ESW+++L + K++V +F+A+WC PCK+++P EL +K +++FL VDVDEL + W ++A PTF K G+ + ++VGA K ELQ V Sbjct: 23 GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CB304730 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17 Identity = 37/100 (37.00%), Postives = 63/100 (63.00%), Query Frame = -2 Query: 231 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELPKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDEL 530 G V T E W+++L + K+++ +F+A WC PCK ++P EL + P+++FL +DVDEL + W ++A PTF ++G+ ++++VGA K EL Sbjct: 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPEL 123 The following BLAST results are available for this feature:
BLAST of CB304730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304730 ID=CB304730; Name=CB304730; organism=Citrus sinensis; type=EST; length=630bpback to top |