CB304734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.443e-30 Identity = 60/124 (48.39%), Postives = 87/124 (70.16%), Query Frame = -1 Query: 196 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 567 L DA+ ++ NAE GK + +I+P+SK+I L VM GYIGEFE++DD ++G V+L GR+N+CGVI PRF + V E+E W R LP+R FG ++L+TS G+M H +AR + +GG +L + Y Sbjct: 6 LADAMSTIKNAENVGKPECIIKPASKLIAMTLKVMADLGYIGEFEFIDDGKSGMFKVKLLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGGHLLAYVY 129
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.579e-30 Identity = 60/130 (46.15%), Postives = 92/130 (70.77%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 M + L +AL + N+E+ GK++V I+P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++NK G I PRF V +E E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRLIAYVY 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_HYPBU (30S ribosomal protein S8P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps8p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.898e-30 Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 MV + L +A+ ++ NAE R K +V+I P+SK+I L VMQ+ GYIGEFEY+DD R GKI V L GR+NK GVI PRF V K++ W + LPSR G ++++TS G+M H EA ++ +GG +L + Y Sbjct: 1 MVMLDTLANAMAAIVNAEMRAKPEVIIMPASKLIANVLRVMQREGYIGEFEYIDDGRWGKIRVRLLGRINKAGVIKPRFSVKYKDLIRMPDWLRKYLPSRDIGILIISTSQGVMSHREAIQRRIGGVLLAYVY 133
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_METMJ (30S ribosomal protein S8P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps8p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.293e-29 Identity = 55/130 (42.31%), Postives = 94/130 (72.31%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 M R++ + DA+ ++ NA GK +V++ P+SK++ L VMQ++G+I FE++DD R G+ V+L+G +NKCG ISPRF V + ++E W ++ LP++ FG ++++TS G++ H EAR + +GG++LG+ Y Sbjct: 1 MARLNPIADAMSTIKNAGDAGKGEVIVEPASKLLGAMLRVMQENGFISGFEFIDDGRGGQFRVQLSGTINKCGAISPRFPVAMADMEYWESQYLPAKNFGILIVSTSKGVISHAEARNEGIGGQLLGYVY 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_KORCO (30S ribosomal protein S8P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps8p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.688e-29 Identity = 62/130 (47.69%), Postives = 86/130 (66.15%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 M R+ L DA+ ++ N GKR+V+I +SK+I K L V+++HGYI EFEYVDD R GK VV LNGR+NK GVI PRF V V E W LP+ G I+++T+ G+M H EA+ + +GG ++ + Y Sbjct: 1 MTRLDPLADAMSTLTNGSMLGKREVVINIASKLIGKVLKVLKEHGYIDEFEYVDDGRFGKYVVRLNGRINKAGVIKPRFPVKVGEFSRWEKIYLPAENVGLIIVSTNQGVMTHREAKERGIGGVLIAYCY 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_METLZ (30S ribosomal protein S8P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps8p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.205e-29 Identity = 59/130 (45.38%), Postives = 89/130 (68.46%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 M + + + DA+ ++ NA GK V + P+S++ L VMQ++GYI FE +DD R G+ + L+G +NKCGVI+PRF V V+++E W R LP + FG I+LTTS G+M HE+AR+ VGG++LG+ + Sbjct: 1 MTKQNPIADAMSAIKNAGDTGKLAVTVEPASRLFGDMLKVMQEYGYITGFEKIDDGRGGQFQIALSGGINKCGVITPRFSVKVEDLESWEIRYLPGKGFGIIILTTSKGVMSHEQARKLGVGGELLGYVF 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_METBF (30S ribosomal protein S8P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps8p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.205e-29 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 MV + L +AL ++ NAE GK +IRP+SK I L VMQ GYIGEFE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++L + Y Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIIRPASKNIGNVLKVMQDLGYIGEFEFIDDGKAGIYSVTLVGRVNKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALIITTSSGVMSQYEAREKKIGGQLLAYVY 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_METB6 (30S ribosomal protein S8P OS=Methanoregula boonei (strain 6A8) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.761e-29 Identity = 56/130 (43.08%), Postives = 88/130 (67.69%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 M R++ + D + ++ NA GK +V I P+SK++ L +MQ GYI FE+++D R G++ V L G++NKCG I PRF V + E+E W + LP + FG ++L+TS G+M H +ARR+ +GG++LG+ Y Sbjct: 1 MTRLNTIADGMSALKNAGDTGKSEVTIEPASKLLGAMLRIMQDAGYIAGFEFIEDGRGGQLKVHLTGKINKCGAICPRFSVQLDEMEYWEKQYLPGKNFGLMILSTSHGVMSHVQARREGIGGELLGYVY 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.912e-29 Identity = 60/130 (46.15%), Postives = 90/130 (69.23%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 MV + +L++AL + NAE GK+QV+I P +K+I L V+Q++GY+GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G+M H EA+ + +GG +L + Y Sbjct: 1 MVMLDLLSNALIQIKNAEIMGKKQVVIWPVNKLIYHTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of CB304734 vs. ExPASy Swiss-Prot
Match: RS8_METMA (30S ribosomal protein S8P OS=Methanosarcina mazei GN=rps8p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.912e-29 Identity = 62/130 (47.69%), Postives = 86/130 (66.15%), Query Frame = -1 Query: 196 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 585 MV + L +AL ++ NAE GK ++RP+SK I L VMQ GYIG+FE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG ++LTTS+G+M EAR K +GG++L + Y Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130 The following BLAST results are available for this feature:
BLAST of CB304734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304734 ID=CB304734; Name=CB304734; organism=Citrus sinensis; type=EST; length=588bpback to top |