CB304749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.713e-32 Identity = 57/105 (54.29%), Postives = 80/105 (76.19%), Query Frame = -3 Query: 236 EGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAV 550 EG V +CH+ E W +LQ+ I K+L+ VDFTA+WC PC+++ P+ EL+KK P + FLKVDVDEL+ VA+EW VEAMPTF+ K+GK ++++VGAKK +L+ V Sbjct: 3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKV 107
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.135e-30 Identity = 57/112 (50.89%), Postives = 83/112 (74.11%), Query Frame = -3 Query: 227 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 562 + AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E AKK P +FLKVDVDELK VAE++ VEAMPTF+ K+G +++VGA+K +LQ + KH Sbjct: 1 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.135e-30 Identity = 57/112 (50.89%), Postives = 83/112 (74.11%), Query Frame = -3 Query: 227 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 562 + AEEG VI+CH + ++ Q+ K A K++++DFTASWC PC+ ++P+ +E AKK P +FLKVDVDELK VAE++ VEAMPTF+ K+G +++VGA+K +LQ + KH Sbjct: 1 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.912e-29 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = -3 Query: 227 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 547 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.912e-29 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = -3 Query: 227 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 547 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.721e-29 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = -3 Query: 227 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 547 G+VI+CHTVE WN +L+ + KLIV+DFTA WCPPC+ ++PI ELAKK V+F KVDVDEL +VA+E+ V+AMPTFV K + L+++VGA K E++ + KH Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKH 117
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.842e-22 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = -3 Query: 230 EAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEK 559 E+E +V+ + W + + KL+VVDF+ASWC PC+++ P + +A K V F+K+DVDEL VA+E+ V AMPTFVL K GK +ERI+GAKK EL+ V K Sbjct: 21 ESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.546e-19 Identity = 44/109 (40.37%), Postives = 69/109 (63.30%), Query Frame = -3 Query: 236 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAV 562 +E G V T ESW+++L + K++V +F+A+WC PCK+++P EL++K +++FL VDVDEL + W ++A PTF K G+ + ++VGA K ELQ V Sbjct: 18 VEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 7.244e-19 Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = -3 Query: 227 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGELQLAVEKH 547 G VI + +W+ QL KG K IVVDFTA+WC PCK+++P+ L+ VIFLKVDVD + +VAE + AMPTF + K+G + +VGA + +L+ V KH Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKH 110
BLAST of CB304749 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.784e-17 Identity = 38/105 (36.19%), Postives = 66/105 (62.86%), Query Frame = -3 Query: 248 LEAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKGEL 562 +E G V T E W+++L + K+++ +F+A WC PCK ++P EL++ P+++FL +DVDEL + W ++A PTF ++G+ ++++VGA K EL Sbjct: 19 IELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPEL 123 The following BLAST results are available for this feature:
BLAST of CB304749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304749 ID=CB304749; Name=CB304749; organism=Citrus sinensis; type=EST; length=567bpback to top |