CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11611 contig Csv1_Contig11611:422..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_COLP3 (Argininosuccinate synthase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=argG PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.944e-67
Identity = 119/183 (65.03%), Postives = 146/183 (79.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY GCEV+ F ADVGQG +EL+G++EKA ASGA +  V DLKEE+VK+YI+P L+ G++YE +YLLGTSMARP+IAKA ++VA +VGADAV HGCTGKGNDQVRFE  F AL PEL V+APWREWD+  RED ++Y  + N+P   +   IYSRD N WH+SHEG  LEDP
Sbjct:   19 LDTSAIIPWLKENYDGCEVIAFCADVGQGDEELEGVKEKAIASGASECYVVDLKEEYVKEYIYPILKTGSVYEGQYLLGTSMARPIIAKAHIEVALKVGADAVCHGCTGKGNDQVRFESCFAALAPELTVIAPWREWDMVSREDLLDYLAERNIPCAASLTKIYSRDANAWHISHEGGELEDP 201          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBVY (Argininosuccinate synthase OS=Vibrio vulnificus (strain YJ016) GN=argG PE=3 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 2.539e-67
Identity = 120/180 (66.67%), Postives = 141/180 (78.33%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTSVI+PWL+ENY CEVV F ADVGQG +EL G+EEKAKASGA +  V DLKEE V DYI+P L+ GA YE KYLLGTSMARPVIAKA V++AR+VGADA+ HGCTGKGNDQVRFE  F AL P+L V+APWREWD+  RE  ++Y  + N+P   +   IYSRD N WH+S EG +LE
Sbjct:   17 LDTSVIIPWLKENYDCEVVAFVADVGQGEEELVGIEEKAKASGASECYVVDLKEELVADYIYPTLKTGAYYEGKYLLGTSMARPVIAKAQVEIARKVGADALCHGCTGKGNDQVRFEGAFAALAPDLKVIAPWREWDLVSREQCLDYLAERNIPCAASLTKIYSRDANAWHISTEGGVLE 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBVU (Argininosuccinate synthase OS=Vibrio vulnificus GN=argG PE=3 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 2.539e-67
Identity = 120/180 (66.67%), Postives = 141/180 (78.33%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTSVI+PWL+ENY CEVV F ADVGQG +EL G+EEKAKASGA +  V DLKEE V DYI+P L+ GA YE KYLLGTSMARPVIAKA V++AR+VGADA+ HGCTGKGNDQVRFE  F AL P+L V+APWREWD+  RE  ++Y  + N+P   +   IYSRD N WH+S EG +LE
Sbjct:   17 LDTSVIIPWLKENYDCEVVAFVADVGQGEEELVGIEEKAKASGASECYVVDLKEELVADYIYPTLKTGAYYEGKYLLGTSMARPVIAKAQVEIARKVGADALCHGCTGKGNDQVRFEGAFAALAPDLKVIAPWREWDLVSREQCLDYLAERNIPCAASLTKIYSRDANAWHISTEGGVLE 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PELTS (Argininosuccinate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=argG PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 4.331e-67
Identity = 119/182 (65.38%), Postives = 149/182 (81.87%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV +PWL+ENYG EV+  +AD+GQG +EL  L EKA  SGA ++ ++D++ EFV+DYIFP L+AGA+YE KYLLGTSMARP+IAK +V++AR+ GA+AVAHG TGKGNDQVRFEL   AL P+L ++APWREWDI+ REDA++YA    +PVPVT++  YS DRNLWHLSHEG  LEDP
Sbjct:   12 LDTSVAIPWLKENYGYEVIAMSADLGQG-EELAPLREKAIKSGASKIYIEDVRREFVEDYIFPTLKAGAVYEGKYLLGTSMARPLIAKKLVEIARKEGAEAVAHGATGKGNDQVRFELAVKALAPDLKIIAPWREWDIRSREDAVDYASARGIPVPVTRERPYSLDRNLWHLSHEGADLEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBFM (Argininosuccinate synthase OS=Vibrio fischeri (strain MJ11) GN=argG PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.656e-67
Identity = 115/181 (63.54%), Postives = 143/181 (79.01%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+PWL+ENY CEV+ F ADVGQG +EL+G+E KA ASGA +  + DLKEE V +YIFP L+ GA+YE KYLLGTSMARP+IAKA V+VAR VGADA+ HGCTGKGNDQ+RFE  F AL P+L+V+APWREWD+  RE+ ++Y  + N+P   +   IYSRD N WH+S EG +LE+
Sbjct:   18 LDTSVIIPWLKENYNCEVIAFVADVGQGEEELEGIEAKAIASGATECYIADLKEEMVSEYIFPTLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALCHGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREECLDYLAERNIPCTASLTKIYSRDANAWHISTEGGVLEE 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBF1 (Argininosuccinate synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=argG PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.656e-67
Identity = 116/181 (64.09%), Postives = 143/181 (79.01%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+PWL+ENY CEV+ F ADVGQG +EL+G+E KA ASGA +  V DLKEE V +YIFP L+ GA+YE KYLLGTSMARP+IAKA V+VAR VGADA+ HGCTGKGNDQ+RFE  F AL P+L+V+APWREWD+  RE+ ++Y  + N+P   +   IYSRD N WH+S EG +LE+
Sbjct:   18 LDTSVIIPWLKENYNCEVIAFVADVGQGEEELEGIEAKAIASGATECYVVDLKEEMVSEYIFPTLKTGALYEGKYLLGTSMARPIIAKAQVEVARNVGADALCHGCTGKGNDQIRFEGAFAALAPDLHVIAPWREWDLVSREECLDYLAERNIPCTASLTKIYSRDANAWHISTEGGVLEE 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBCM (Argininosuccinate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=argG PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.656e-67
Identity = 118/180 (65.56%), Postives = 144/180 (80.00%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTSVI+PWL+ENY CEVV F ADVGQG +EL G+E KA +SGA +  + DLKEEFVK+YI+P L+ GA YE KYLLGTSMARPVIAKA V++AR+VGADA+AHGCTGKGNDQVRFE  F AL P+L+V+APWREWD++ RE  ++Y  + N+P   +   IYSRD N WH+S EG +LE
Sbjct:   17 LDTSVIIPWLKENYDCEVVAFVADVGQGDEELKGVEAKALSSGASECYIVDLKEEFVKEYIYPTLKTGAYYEGKYLLGTSMARPVIAKAQVEIARKVGADALAHGCTGKGNDQVRFEGAFAALAPDLHVIAPWREWDLRSREACLDYLAERNIPCAASLTKIYSRDANAWHVSTEGGVLE 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBCH (Argininosuccinate synthase OS=Vibrio cholerae GN=argG PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.656e-67
Identity = 118/180 (65.56%), Postives = 144/180 (80.00%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTSVI+PWL+ENY CEVV F ADVGQG +EL G+E KA +SGA +  + DLKEEFVK+YI+P L+ GA YE KYLLGTSMARPVIAKA V++AR+VGADA+AHGCTGKGNDQVRFE  F AL P+L+V+APWREWD++ RE  ++Y  + N+P   +   IYSRD N WH+S EG +LE
Sbjct:   17 LDTSVIIPWLKENYDCEVVAFVADVGQGDEELKGVEAKALSSGASECYIVDLKEEFVKEYIYPTLKTGAYYEGKYLLGTSMARPVIAKAQVEIARKVGADALAHGCTGKGNDQVRFEGAFAALAPDLHVIAPWREWDLRSREACLDYLAERNIPCAASLTKIYSRDANAWHVSTEGGVLE 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VIBC3 (Argininosuccinate synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=argG PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 5.656e-67
Identity = 118/180 (65.56%), Postives = 144/180 (80.00%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTSVI+PWL+ENY CEVV F ADVGQG +EL G+E KA +SGA +  + DLKEEFVK+YI+P L+ GA YE KYLLGTSMARPVIAKA V++AR+VGADA+AHGCTGKGNDQVRFE  F AL P+L+V+APWREWD++ RE  ++Y  + N+P   +   IYSRD N WH+S EG +LE
Sbjct:   17 LDTSVIIPWLKENYDCEVVAFVADVGQGDEELKGVEAKALSSGASECYIVDLKEEFVKEYIYPTLKTGAYYEGKYLLGTSMARPVIAKAQVEIARKVGADALAHGCTGKGNDQVRFEGAFAALAPDLHVIAPWREWDLRSREACLDYLAERNIPCAASLTKIYSRDANAWHVSTEGGVLE 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THEPX (Argininosuccinate synthase OS=Thermoanaerobacter sp. (strain X514) GN=argG PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 7.388e-67
Identity = 115/182 (63.19%), Postives = 150/182 (82.42%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+PWL+ENY CE++    +VGQG +EL  +++KA ASGA ++ ++D+KEEFVKDYIFP L+AGA+YE KYLLGTSMARP+IAK +V++A + GA A+AHG TGKGNDQVRFE++  AL+P + ++APWR WD++ RED I+YAKK  +P+PVTK+ IYS D NLWH+SHEG  LEDP
Sbjct:   15 LDTSVIIPWLKENYECEIIAACINVGQG-EELKYIKDKALASGASKVYIEDVKEEFVKDYIFPTLKAGAVYEGKYLLGTSMARPLIAKKLVEIAHKEGAKAIAHGATGKGNDQVRFEVSIHALDPSIKIIAPWRIWDLKSREDEIDYAKKKGIPIPVTKEKIYSVDNNLWHVSHEGGDLEDP 195          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_COLP31.944e-6765.03Argininosuccinate synthase OS=Colwellia psychreryt... [more]
ASSY_VIBVY2.539e-6766.67Argininosuccinate synthase OS=Vibrio vulnificus (s... [more]
ASSY_VIBVU2.539e-6766.67Argininosuccinate synthase OS=Vibrio vulnificus GN... [more]
ASSY_PELTS4.331e-6765.38Argininosuccinate synthase OS=Pelotomaculum thermo... [more]
ASSY_VIBFM5.656e-6763.54Argininosuccinate synthase OS=Vibrio fischeri (str... [more]
ASSY_VIBF15.656e-6764.09Argininosuccinate synthase OS=Vibrio fischeri (str... [more]
ASSY_VIBCM5.656e-6765.56Argininosuccinate synthase OS=Vibrio cholerae sero... [more]
ASSY_VIBCH5.656e-6765.56Argininosuccinate synthase OS=Vibrio cholerae GN=a... [more]
ASSY_VIBC35.656e-6765.56Argininosuccinate synthase OS=Vibrio cholerae sero... [more]
ASSY_THEPX7.388e-6763.19Argininosuccinate synthase OS=Thermoanaerobacter s... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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