CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_NITEC (Argininosuccinate synthase OS=Nitrosomonas eutropha (strain C91) GN=argG PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.187e-58
Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA   G  ++ ++DL+EEFV+DY+FP  RA  +YE +YLLGTS+ARP+IAK  V++A++ GADAV+HG TGKGNDQVRFEL ++AL P++ V+APWREWD+  RE  + YA+K  +P+ + KK  S YS D NL H+S+EG  LEDP
Sbjct:   15 LDTSVILKWLQDTYQCEVVTFTADIGQG-EEIEPARAKALQFGIKEIFIEDLREEFVRDYVFPMFRANTVYEGEYLLGTSIARPLIAKRQVEIAQQTGADAVSHGATGKGNDQVRFELGYYALQPDIRVIAPWREWDLTSREKLLAYAEKQGIPIEMKKKQGSPYSMDANLLHISYEGRALEDP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_MARMS (Argininosuccinate synthase OS=Marinomonas sp. (strain MWYL1) GN=argG PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.187e-58
Identity = 106/185 (57.30%), Postives = 139/185 (75.14%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT---KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI  WL+E Y CEVV FTAD+GQG +E++    KA+A G  ++ ++DL+EEFV+D++FP  RA  IYE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  + Y ++H +PV  +   KKS YS D NL H+S EGD LEDP
Sbjct:   15 LDTSVIAKWLQEEYNCEVVTFTADLGQG-EEVEPARAKAQALGIKEIYIEDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLTSRETLMAYCEEHKIPVDFSTKKKKSPYSMDANLLHISFEGDQLEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_HAHCH (Argininosuccinate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=argG PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.187e-58
Identity = 107/183 (58.47%), Postives = 137/183 (74.86%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK-KSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVIV WL+ENY CEVV FTAD+GQG +E++    KA+  G  Q+ ++DL+EEF +D++FP  RA  IYE +YLLGTS+ARP+IAK +V++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  + Y   H++ V   K KS YS D NL H+S+EG ILEDP
Sbjct:   15 LDTSVIVKWLQENYDCEVVTFTADIGQG-EEVEPARAKAEKLGVKQIFIEDLREEFARDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIANETGADAISHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDLTSREKLLTYCDTHDIAVEKKKGKSPYSMDANLLHISYEGGILEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_HALHL (Argininosuccinate synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=argG PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.069e-57
Identity = 105/184 (57.07%), Postives = 139/184 (75.54%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL E YGCEVV FTAD+GQG +EL+    KA+A G  ++ V DL+EEF +D++FP  RA A+YE +YLLGTS+ARP+IAK  V++ARE GADAVAHG TGKGNDQVRFEL ++ L P + V+APWREWD+  RE  ++YA++H + +   ++   + YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLEETYGCEVVTFTADLGQG-EELEPARRKAEAFGIREIYVDDLREEFARDFVFPMFRANAVYEGEYLLGTSIARPLIAKRQVEIARETGADAVAHGATGKGNDQVRFELGYYGLEPGIKVIAPWREWDLNSRERLLQYAERHGIDIEGKREEGGAPYSMDANLLHISYEGGVLED 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEPK (Argininosuccinate synthase OS=Pseudomonas putida (strain KT2440) GN=argG PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.396e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEP1 (Argininosuccinate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=argG PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.396e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEF5 (Argininosuccinate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=argG PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.396e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEE4 (Argininosuccinate synthase OS=Pseudomonas entomophila (strain L48) GN=argG PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.396e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEPW (Argininosuccinate synthase OS=Pseudomonas putida (strain W619) GN=argG PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.824e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYDCEVVTFTADLGQG-EEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_NITEU (Argininosuccinate synthase OS=Nitrosomonas europaea GN=argG PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.824e-57
Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA   G  ++ ++DL+EEFV+DY+FP  RA  IYE +YLLGTS+ARP+IAK  V++A++ GADAV+HG TGKGNDQVRFEL ++AL P++ V+APWREWD+  RE  + YA+K  +P+ + +K  S YS D NL H+S+EG  LEDP
Sbjct:   15 LDTSVILKWLQDTYQCEVVTFTADIGQG-EEIEPARAKAVQFGIREIFIEDLREEFVRDYVFPMFRANTIYEGEYLLGTSIARPLIAKRQVEIAQQTGADAVSHGATGKGNDQVRFELGYYALQPDIRVIAPWREWDLTSREKLLTYAEKQGIPIEMKQKAGSPYSMDANLLHISYEGRALEDP 197          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_NITEC8.187e-5856.52Argininosuccinate synthase OS=Nitrosomonas eutroph... [more]
ASSY_MARMS8.187e-5857.30Argininosuccinate synthase OS=Marinomonas sp. (str... [more]
ASSY_HAHCH8.187e-5858.47Argininosuccinate synthase OS=Hahella chejuensis (... [more]
ASSY_HALHL1.069e-5757.07Argininosuccinate synthase OS=Halorhodospira halop... [more]
ASSY_PSEPK1.396e-5756.28Argininosuccinate synthase OS=Pseudomonas putida (... [more]
ASSY_PSEP11.396e-5756.28Argininosuccinate synthase OS=Pseudomonas putida (... [more]
ASSY_PSEF51.396e-5756.28Argininosuccinate synthase OS=Pseudomonas fluoresc... [more]
ASSY_PSEE41.396e-5756.28Argininosuccinate synthase OS=Pseudomonas entomoph... [more]
ASSY_PSEPW1.824e-5756.28Argininosuccinate synthase OS=Pseudomonas putida (... [more]
ASSY_NITEU1.824e-5756.52Argininosuccinate synthase OS=Nitrosomonas europae... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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