CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CAMJD (Argininosuccinate synthase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=argG PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.382e-57
Identity = 106/185 (57.30%), Postives = 139/185 (75.14%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK-KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +EL+   +KA + G  +  + +KDL++EFVKDY+FP  RA AIYE +YLLGTS+ARP+IAK    +A + GADAV+HG TGKGNDQVRFEL + A NP+L ++APWREWD+  RE  + YA+KH + +   K KS YS D NL H+S+EG +LEDP
Sbjct:   16 LDTSIILKWLQDEYNCEVVTFTADIGQG-EELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKLLAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CAMJ8 (Argininosuccinate synthase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=argG PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.382e-57
Identity = 106/185 (57.30%), Postives = 139/185 (75.14%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK-KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +EL+   +KA + G  +  + +KDL++EFVKDY+FP  RA AIYE +YLLGTS+ARP+IAK    +A + GADAV+HG TGKGNDQVRFEL + A NP+L ++APWREWD+  RE  + YA+KH + +   K KS YS D NL H+S+EG +LEDP
Sbjct:   16 LDTSIILKWLQDEYNCEVVTFTADIGQG-EELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKLLAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BUCAP (Argininosuccinate synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=argG PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.382e-57
Identity = 100/181 (55.25%), Postives = 133/181 (73.48%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS I+PWL+ENY  +VV F AD+GQ  K+L+G+E+KA  SGA    V DLKEEF+KDY++P L+ G++YE  YLLGT++ARP+IAK  V+ A  +GA  + HG TGKGNDQVRFE+ + AL P + V+APWREW++  RE  +EY ++ N+P   T + IYSRD N  H+S EG +LED
Sbjct:   15 LDTSAIIPWLKENYHVDVVAFVADIGQSKKDLNGIEKKALQSGAIDCRVFDLKEEFIKDYVYPVLKTGSLYEGNYLLGTAIARPIIAKKQVEFASSIGAKFLCHGATGKGNDQVRFEIAYAALAPYMKVIAPWREWNLNSRESLLEYLREKNIPTSATLEKIYSRDENSLHISTEGGLLED 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RUTMC (Argininosuccinate synthase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=argG PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.111e-57
Identity = 103/185 (55.68%), Postives = 143/185 (77.30%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPV---TKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+IV WL++ Y CEVV FTAD+GQG +E++    KAKA+G  ++ +++L+EEFV+D++FP  RA AIYE +YLLGTS+ARP+I+K +V++A +  ADA++HG TGKGNDQVRFEL  +AL+ ++ V+APWREWD+  RE  ++YA+KH + +      KKS YS D NL H+S+EG ILEDP
Sbjct:   17 LDTSIIVKWLQDTYRCEVVTFTADIGQG-EEVELARTKAKAAGVKEVYIENLREEFVRDFVFPMFRANAIYEGEYLLGTSIARPLISKRLVEIAHQEDADAISHGATGKGNDQVRFELNAYALDADIQVIAPWREWDLSSRESLMDYAQKHGIEIDYKKQLKKSPYSMDANLLHISYEGGILEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSYWF (Argininosuccinate synthase OS=Psychrobacter sp. (strain PRwf-1) GN=argG PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.111e-57
Identity = 104/185 (56.22%), Postives = 138/185 (74.59%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT---KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I  WL++ Y  EV+ FTAD+GQG +E++    KA+A G   + ++DL+ EF +DY+FP  RA AIYE +YLLGTS+ARP+IAK +V++A+E  ADA++HG TGKGNDQVRFEL   AL P++  +APWREWD+  RE  + YAK+HN+P+      KKS YS D NL H+S+EGDILEDP
Sbjct:   20 LDTSIIAKWLQDTYDAEVITFTADIGQG-EEVEPARAKAEAMGIKHIHIEDLRAEFARDYVFPMFRANAIYEGEYLLGTSIARPLIAKRLVEIAKEHNADAISHGATGKGNDQVRFELGAIALAPDVKTIAPWREWDLSSRESLMAYAKEHNIPIDFAANKKKSPYSMDANLLHISYEGDILEDP 203          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEU5 (Argininosuccinate synthase OS=Pseudomonas stutzeri (strain A1501) GN=argG PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.111e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQALGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOK5 (Argininosuccinate synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=argG PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.111e-57
Identity = 99/182 (54.40%), Postives = 138/182 (75.82%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENY  +V+    DVGQ   +++ +  KA  +GA ++ ++D+KEEFV+DY+F  ++A  +YE  YLLGTS+ARP++AK +V++A   GA  +AHGCTGKGNDQVRFE+   + +P+L ++APWR WDI+ REDAI+YA    V VPVTK+ IYS D+N+WH+SHEG  LEDP
Sbjct:   13 LDTSIIIPWLKENYDLDVIAACIDVGQD-DDMEAVRNKAIKTGAVKVYIEDVKEEFVRDYLFSAVKAHILYEDAYLLGTSLARPLMAKRLVEIAHAEGAKYIAHGCTGKGNDQVRFEVGVASFDPKLGIIAPWRIWDIKSREDAIDYANSKGVEVPVTKEKIYSNDKNIWHVSHEGGDLEDP 193          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOK1 (Argininosuccinate synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=argG PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.111e-57
Identity = 99/182 (54.40%), Postives = 138/182 (75.82%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENY  +V+    DVGQ   +++ +  KA  +GA ++ ++D+KEEFV+DY+F  ++A  +YE  YLLGTS+ARP++AK +V++A   GA  +AHGCTGKGNDQVRFE+   + +P+L ++APWR WDI+ REDAI+YA    V VPVTK+ IYS D+N+WH+SHEG  LEDP
Sbjct:   13 LDTSIIIPWLKENYDLDVIAACIDVGQD-DDMEAVRNKAIKTGAVKVYIEDVKEEFVRDYLFSAVKAHILYEDAYLLGTSLARPLMAKRLVEIAHAEGAKYIAHGCTGKGNDQVRFEVGVASFDPKLGIIAPWRIWDIKSREDAIDYANSKGVEVPVTKEKIYSNDKNIWHVSHEGGDLEDP 193          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THICR (Argininosuccinate synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=argG PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.063e-57
Identity = 103/184 (55.98%), Postives = 141/184 (76.63%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT--KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I  WL+E Y CEVV FTAD+GQG +E+     KA+A G  ++ ++DL+EEF +D++FP +RA AIYE +Y LGTS+ARP+I+K +V++A+E GADA++HG TGKGNDQVRFEL  +AL P++ V+APWREWD+  RE  + YA++HN+ +     KKS YS D NL H+S+EG I+EDP
Sbjct:   15 LDTSIIAKWLQEEYQCEVVTFTADIGQG-EEVAPARAKAEAMGIKEIYIEDLREEFARDFVFPMMRANAIYEGEYRLGTSIARPLISKRLVEIAQETGADAISHGATGKGNDQVRFELNAYALMPDVKVIAPWREWDLLSREKLMAYAEEHNIAIEKKKGKKSPYSMDANLLHISYEGGIIEDP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHORT (Argininosuccinate synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=argG PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 4.063e-57
Identity = 102/184 (55.43%), Postives = 138/184 (75.00%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK--KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +EL+   +KA+  G  ++ ++DL+EEFV+DY+FP  RA  +YE  YLLGTS+ARP+I K +V++A   GADAV+HG TGKGNDQVRFELT +AL P++ ++APWR WD+  R   IEYA +H +PVP  K  ++ YS D NL H+S+EG  LE+P
Sbjct:   17 LDTSIILRWLQDEYDCEVVTFTADIGQG-EELEPARQKAEMMGIKEIYIEDLREEFVRDYVFPMFRANTLYEGVYLLGTSIARPLIGKRLVEIAEATGADAVSHGATGKGNDQVRFELTAYALKPDIKIIAPWRTWDLHSRTKLIEYAMRHQIPVPKDKHGEAPYSMDANLLHISYEGKALENP 199          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_CAMJD2.382e-5757.30Argininosuccinate synthase OS=Campylobacter jejuni... [more]
ASSY_CAMJ82.382e-5757.30Argininosuccinate synthase OS=Campylobacter jejuni... [more]
ASSY_BUCAP2.382e-5755.25Argininosuccinate synthase OS=Buchnera aphidicola ... [more]
ASSY_RUTMC3.111e-5755.68Argininosuccinate synthase OS=Ruthia magnifica sub... [more]
ASSY_PSYWF3.111e-5756.22Argininosuccinate synthase OS=Psychrobacter sp. (s... [more]
ASSY_PSEU53.111e-5756.28Argininosuccinate synthase OS=Pseudomonas stutzeri... [more]
ASSY_CLOK53.111e-5754.40Argininosuccinate synthase OS=Clostridium kluyveri... [more]
ASSY_CLOK13.111e-5754.40Argininosuccinate synthase OS=Clostridium kluyveri... [more]
ASSY_THICR4.063e-5755.98Argininosuccinate synthase OS=Thiomicrospira cruno... [more]
ASSY_RHORT4.063e-5755.43Argininosuccinate synthase OS=Rhodospirillum rubru... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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