CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_METFK (Argininosuccinate synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=argG PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.063e-57
Identity = 103/185 (55.68%), Postives = 140/185 (75.68%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +EL+   EKA+  G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A+E  ADAV+HG TGKGNDQVRFEL  +ALNP + ++APWREWD+  RE  + YA+KH +PV +  +   S YS D NL H+S+EG  LE+P
Sbjct:   15 LDTSVILKWLQDTYQCEVVTFTADIGQG-EELEPAREKARQFGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIAQETNADAVSHGATGKGNDQVRFELGAYALNPNIKIIAPWREWDLLSREKLLAYAEKHGIPVEMKHRQGGSPYSMDANLLHISYEGRHLENP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSYCK (Argininosuccinate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 105/185 (56.76%), Postives = 139/185 (75.14%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT---KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I  WL+E Y  EV+ FTAD+GQG +E++    KA+A G   + ++DL+EEF +DY+FP  RA AIYE +YLLGTS+ARP+IAK +V++A+E  ADA++HG TGKGNDQVRFEL   AL+P++  +APWREWD+  RE  +EYAK+HN+ +      KKS YS D NL H+S+EG ILEDP
Sbjct:   20 LDTSIIARWLQETYDAEVITFTADIGQG-EEVEPARAKAEAMGIKHIHIEDLREEFARDYVFPMFRANAIYEGEYLLGTSIARPLIAKRLVEIAKEHNADAISHGATGKGNDQVRFELGAVALSPDVVTIAPWREWDLSSRESLMEYAKEHNIAIDYAGNKKKSPYSMDANLLHISYEGGILEDP 203          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSYA2 (Argininosuccinate synthase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 105/185 (56.76%), Postives = 139/185 (75.14%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT---KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I  WL+E Y  EV+ FTAD+GQG +E++    KA+A G   + ++DL+EEF +DY+FP  RA AIYE +YLLGTS+ARP+IAK +V++A+E  ADA++HG TGKGNDQVRFEL   AL+P++  +APWREWD+  RE  +EYAK+HN+ +      KKS YS D NL H+S+EG ILEDP
Sbjct:   20 LDTSIIARWLQETYDAEVITFTADIGQG-EEVEPARAKAEAMGIKHIHIEDLREEFARDYVFPMFRANAIYEGEYLLGTSIARPLIAKRLVEIAKEHNADAISHGATGKGNDQVRFELGAVALSPDVVTIAPWREWDLSSRESLMEYAKEHNISIDYAGNKKKSPYSMDANLLHISYEGGILEDP 203          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEMY (Argininosuccinate synthase OS=Pseudomonas mendocina (strain ymp) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 103/183 (56.28%), Postives = 140/183 (76.50%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D+++P  RA  IYE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQALGVKEIYIDDLREEFVRDFVYPMFRANTIYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_JANSC (Argininosuccinate synthase OS=Jannaschia sp. (strain CCS1) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 104/184 (56.52%), Postives = 141/184 (76.63%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEVV FTAD+GQG +EL+   +KA+  GA  + V+DL+EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K +V++A E GADAV+HG TGKGNDQVRFEL  ++LNPE+ V+APWR+W++  R   IE+A+KH +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   15 LDTSIILKWLQTEYGCEVVTFTADLGQG-EELEPARKKAEMMGAAGIYVEDLREEFVRDFVFPMFRANALYEGLYLLGTSIARPLISKRLVEIAEETGADAVSHGATGKGNDQVRFELCAYSLNPEIEVIAPWRKWELGSRTKLIEFAEKHQIPIAKDKRGEAPFSVDANLLHTSSEGKMLEDP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOBM (Argininosuccinate synthase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 102/181 (56.35%), Postives = 139/181 (76.80%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+PWL+ENY  +V+    +VGQG  ++D ++ KA  SGA ++ V+D+KEEFV DY++  +++ A+YE+ Y+LGTS ARP++AK +V++A +  A  + HGCTGKGNDQVRFE+   A +P + ++APWR WDI+ REDAI+YAKK  V VPVTKK IYS DRNLWH+SHEG  LED
Sbjct:   13 LDTSIIIPWLKENYDLDVIAVCVNVGQG-DDMDYVKTKAIKSGASKIYVEDVKEEFVVDYLYKAIKSEALYEQDYMLGTSFARPLMAKKLVEIAHKEQAKYICHGCTGKGNDQVRFEVGVKAQDPTIKIIAPWRIWDIKSREDAIDYAKKVGVEVPVTKKKIYSVDRNLWHVSHEGGDLED 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOBL (Argininosuccinate synthase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 102/181 (56.35%), Postives = 139/181 (76.80%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+PWL+ENY  +V+    +VGQG  ++D ++ KA  SGA ++ V+D+KEEFV DY++  +++ A+YE+ Y+LGTS ARP++AK +V++A +  A  + HGCTGKGNDQVRFE+   A +P + ++APWR WDI+ REDAI+YAKK  V VPVTKK IYS DRNLWH+SHEG  LED
Sbjct:   13 LDTSIIIPWLKENYDLDVIAVCVNVGQG-DDMDYVKTKAIKSGASKIYVEDVKEEFVVDYLYKAIKSEALYEQDYMLGTSFARPLMAKKLVEIAHKEQAKYICHGCTGKGNDQVRFEVGVKAQDPTIKIIAPWRIWDIKSREDAIDYAKKVGVEVPVTKKKIYSVDRNLWHVSHEGGDLED 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOBK (Argininosuccinate synthase OS=Clostridium botulinum (strain Okra / Type B1) GN=argG PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 102/181 (56.35%), Postives = 139/181 (76.80%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+PWL+ENY  +V+    +VGQG  ++D ++ KA  SGA ++ V+D+KEEFV DY++  +++ A+YE+ Y+LGTS ARP++AK +V++A +  A  + HGCTGKGNDQVRFE+   A +P + ++APWR WDI+ REDAI+YAKK  V VPVTKK IYS DRNLWH+SHEG  LED
Sbjct:   13 LDTSIIIPWLKENYDLDVIAVCVNVGQG-DDMDYVKTKAIKSGASKIYVEDVKEEFVVDYLYKAIKSEALYEQDYMLGTSFARPLMAKKLVEIAHKEQAKYICHGCTGKGNDQVRFEVGVKAQDPTIKIIAPWRIWDIKSREDAIDYAKKVGVEVPVTKKKIYSVDRNLWHVSHEGGDLED 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY1_RHIL3 (Argininosuccinate synthase 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=argG1 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.307e-57
Identity = 108/184 (58.70%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+E YGCEVV FTAD+GQG +EL+    KA+ SG   + + DL+EEFV D++FP LRA A+YE +YLLG+S+ARP+IAK +V +AREVGADAVAHG TGKGNDQ+RFEL   AL+P + V+APWR+W+I+ R    EYA+KH +PVP  K+  + +S D NL H S EG  LE+P
Sbjct:   15 LDTSIILKWLQETYGCEVVTFTADLGQG-EELEPARAKAEMSGVKDIRIVDLREEFVSDFVFPMLRANALYEGQYLLGSSIARPLIAKHLVGIAREVGADAVAHGATGKGNDQIRFELAVNALDPSIKVIAPWRQWNIRSRLQLSEYAEKHRIPVPSDKRGEAPFSIDANLLHTSTEGKSLENP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEPG (Argininosuccinate synthase OS=Pseudomonas putida (strain GB-1) GN=argG PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 6.931e-57
Identity = 102/183 (55.74%), Postives = 139/183 (75.96%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A   GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANATGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_METFK4.063e-5755.68Argininosuccinate synthase OS=Methylobacillus flag... [more]
ASSY_PSYCK5.307e-5756.76Argininosuccinate synthase OS=Psychrobacter cryoha... [more]
ASSY_PSYA25.307e-5756.76Argininosuccinate synthase OS=Psychrobacter arctic... [more]
ASSY_PSEMY5.307e-5756.28Argininosuccinate synthase OS=Pseudomonas mendocin... [more]
ASSY_JANSC5.307e-5756.52Argininosuccinate synthase OS=Jannaschia sp. (stra... [more]
ASSY_CLOBM5.307e-5756.35Argininosuccinate synthase OS=Clostridium botulinu... [more]
ASSY_CLOBL5.307e-5756.35Argininosuccinate synthase OS=Clostridium botulinu... [more]
ASSY_CLOBK5.307e-5756.35Argininosuccinate synthase OS=Clostridium botulinu... [more]
ASSY1_RHIL35.307e-5758.70Argininosuccinate synthase 1 OS=Rhizobium legumino... [more]
ASSY_PSEPG6.931e-5755.74Argininosuccinate synthase OS=Pseudomonas putida (... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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