CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SPHWW (Argininosuccinate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=argG PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 107/186 (57.53%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +EL+    KAK  G     + + DL+EEFVKDY+FP +R  A+YE  YLLGTS+ARP+IAK  +++AR VGADAV+HG TGKGNDQVRFEL ++ L P++ V+APWREWD+  R   I++A+KH +PVP  K+  S +S D NL H S EG +LEDP
Sbjct:   15 LDTSVILKWLQQTYQCEVVTFTADLGQG-EELEPARAKAKLMGVPDEHIFIDDLREEFVKDYVFPMMRGNALYEGLYLLGTSIARPLIAKRQIEIARAVGADAVSHGATGKGNDQVRFELGYYGLAPDIRVIAPWREWDLTSRTALIDFAEKHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_EHRCR (Argininosuccinate synthase OS=Ehrlichia chaffeensis (strain Arkansas) GN=argG PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 103/184 (55.98%), Postives = 135/184 (73.37%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKS--IYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+ENY CEVV FTAD+GQ   ++  + +KA AS   ++ ++DLKEEFVKD++FP  RA  +YE  YLLGTS+ARP+IAK  +++A   GADAVAHG TGKGNDQ+RFE  +++ +P + V+APWR+W++  R   IEYAKKH + VP+ K S   YS D NL H S+EG  LEDP
Sbjct:   12 LDTSVILKWLQENYNCEVVVFTADLGQN-DDMSAIRQKAAASNVKEIFIEDLKEEFVKDFVFPMFRANTVYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAHGATGKGNDQIRFEFGYYSCDPNIKVIAPWRQWELTSRNSLIEYAKKHGIDVPLDKASEPPYSIDANLLHTSYEGKSLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CAMJE (Argininosuccinate synthase OS=Campylobacter jejuni GN=argG PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 105/185 (56.76%), Postives = 139/185 (75.14%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK-KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +EL+   +KA + G  +  + +KDL++EFVKDY+FP  RA AIYE +YLLGTS+ARP+IAK    +A + GADAV+HG TGKGNDQVRFEL + A +P+L ++APWREWD+  RE  + YA+KH + +   K KS YS D NL H+S+EG +LEDP
Sbjct:   16 LDTSIILKWLQDEYNCEVVTFTADIGQG-EELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFSPDLKIIAPWREWDLNSREKLLAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AZOVD (Argininosuccinate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=argG PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.052e-57
Identity = 102/183 (55.74%), Postives = 139/183 (75.96%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP--VTKKSIYSRDRNLWHLSHEGDILED 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++A   GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  ++YA+KH +P+     KKS YS D NL H+S+EG +LED
Sbjct:   15 LDTSVILKWLQDTYNCEVVTFTADLGQG-EEVEPARAKAQALGVKEIFIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANATGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLED 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SPHAL (Argininosuccinate synthase OS=Sphingopyxis alaskensis GN=argG PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 108/186 (58.06%), Postives = 140/186 (75.27%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+  YGCEVV FTAD+GQG +EL+    KA+  G     + + DL+EEFV+D++FP +RA A YE  YLLGTS+ARP+I+K +V++ARE GADAVAHG TGKGNDQVRFEL+ +ALNP++ V+APWREWD+  R   I +A++H +PVP  K+  S +S D NL H S EG +LEDP
Sbjct:   16 LDTSVILKWLQVTYGCEVVTFTADLGQG-EELEPARAKAELMGIKPEHIYIDDLREEFVRDFVFPMMRANARYEGDYLLGTSIARPLISKRLVEIARETGADAVAHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDLTSRTALIAWAEQHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOBH (Argininosuccinate synthase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=argG PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 101/181 (55.80%), Postives = 139/181 (76.80%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+PWL+ENY  +V+    +VGQG  ++D ++ KA  SGA ++ V+D+KEEFV DY++  +++ A+YE+ Y+LGTS ARP++AK +V++A +  A  + HGCTGKGNDQVRFE+   A +P + ++APWR WDI+ REDAI+YAKK  V VPVTKK IYS D+NLWH+SHEG  LED
Sbjct:   13 LDTSIIIPWLKENYDLDVIAVCVNVGQG-DDMDYVKTKAIKSGASKIYVEDVKEEFVVDYLYKAIKSEALYEQDYMLGTSFARPLMAKKLVEIAHKEQAKYICHGCTGKGNDQVRFEVGVKAQDPTIKIIAPWRIWDIKSREDAIDYAKKVGVEVPVTKKKIYSVDKNLWHVSHEGGDLED 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOB6 (Argininosuccinate synthase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=argG PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 101/181 (55.80%), Postives = 139/181 (76.80%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+PWL+ENY  +V+    +VGQG  ++D ++ KA  SGA ++ V+D+KEEFV DY++  +++ A+YE+ Y+LGTS ARP++AK +V++A +  A  + HGCTGKGNDQVRFE+   A +P + ++APWR WDI+ REDAI+YAKK  V VPVTKK IYS D+NLWH+SHEG  LED
Sbjct:   13 LDTSIIIPWLKENYDLDVIAVCVNVGQG-DDMDYVKTKAIKSGASKIYVEDVKEEFVVDYLYKAIKSEALYEQDYMLGTSFARPLMAKKLVEIAHKEQAKYICHGCTGKGNDQVRFEVGVKAQDPTIKIIAPWRIWDIKSREDAIDYAKKVGVEVPVTKKKIYSVDKNLWHVSHEGGDLED 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOB1 (Argininosuccinate synthase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=argG PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 101/181 (55.80%), Postives = 139/181 (76.80%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+PWL+ENY  +V+    +VGQG  ++D ++ KA  SGA ++ V+D+KEEFV DY++  +++ A+YE+ Y+LGTS ARP++AK +V++A +  A  + HGCTGKGNDQVRFE+   A +P + ++APWR WDI+ REDAI+YAKK  V VPVTKK IYS D+NLWH+SHEG  LED
Sbjct:   13 LDTSIIIPWLKENYDLDVIAVCVNVGQG-DDMDYVKTKAIKSGASKIYVEDVKEEFVVDYLYKAIKSEALYEQDYMLGTSFARPLMAKKLVEIAHKEQAKYICHGCTGKGNDQVRFEVGVKAQDPTIKIIAPWRIWDIKSREDAIDYAKKVGVEVPVTKKKIYSVDKNLWHVSHEGGDLED 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ZYMMO (Argininosuccinate synthase OS=Zymomonas mobilis GN=argG PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.544e-56
Identity = 107/186 (57.53%), Postives = 141/186 (75.81%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+E+YGCEVV FTAD+GQG +EL+   +KA+  G     + + DL+EEFV+D++FP +RA A+YE +YLLGTS+ARP+IAK  +++AR+VGADAVAHG TGKGNDQ+RFEL ++AL P++ V+APWREWD+  R   I YA+   + VP  K+  S +S D NL H S EG ILEDP
Sbjct:   16 LDTSVILKWLQEHYGCEVVTFTADLGQG-EELEPARKKAEMMGIKPEHIFMDDLREEFVRDFVFPMMRANALYEGQYLLGTSIARPLIAKRQIEIARQVGADAVAHGATGKGNDQIRFELGYYALAPDIKVIAPWREWDLNSRSKLIAYAESRQIAVPKDKRGESPFSVDSNLLHTSSEGKILEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ROSDO (Argininosuccinate synthase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=argG PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.544e-56
Identity = 101/184 (54.89%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEVV FTAD+GQG +EL+    KA+  GA  + ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K +V++A E GADA+AHG TGKGNDQVRFEL  +ALNP++ V+APWREWD+  R   I++A+K+ +P+   K+  + +S D NL H S EG +LE+P
Sbjct:   15 LDTSIILKWLQTEYGCEVVTFTADLGQG-EELEPARAKAEMMGASDIYIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADAIAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFAEKNQIPIAKDKRGEAPFSVDANLLHTSSEGKVLENP 197          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_SPHWW9.052e-5757.53Argininosuccinate synthase OS=Sphingomonas wittich... [more]
ASSY_EHRCR9.052e-5755.98Argininosuccinate synthase OS=Ehrlichia chaffeensi... [more]
ASSY_CAMJE9.052e-5756.76Argininosuccinate synthase OS=Campylobacter jejuni... [more]
ASSY_AZOVD9.052e-5755.74Argininosuccinate synthase OS=Azotobacter vineland... [more]
ASSY_SPHAL1.182e-5658.06Argininosuccinate synthase OS=Sphingopyxis alasken... [more]
ASSY_CLOBH1.182e-5655.80Argininosuccinate synthase OS=Clostridium botulinu... [more]
ASSY_CLOB61.182e-5655.80Argininosuccinate synthase OS=Clostridium botulinu... [more]
ASSY_CLOB11.182e-5655.80Argininosuccinate synthase OS=Clostridium botulinu... [more]
ASSY_ZYMMO1.544e-5657.53Argininosuccinate synthase OS=Zymomonas mobilis GN... [more]
ASSY_ROSDO1.544e-5654.89Argininosuccinate synthase OS=Roseobacter denitrif... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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