CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_EHRRW (Argininosuccinate synthase OS=Ehrlichia ruminantium (strain Welgevonden) GN=argG PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.967e-55
Identity = 101/184 (54.89%), Postives = 136/184 (73.91%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK--KSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+ENY CEVV FTAD+GQ   ++  +++KA A    ++ ++DLKEEFV+D++FP  RA  IYE  YLLGTS+ARP+IAK  +++A   GADAVAHG TGKGNDQVRFE  ++  +P + V+APWR+W++  R   IEYA+K+N+ VP+ K  +  YS D NL H+S+EG  LEDP
Sbjct:   12 LDTSVILKWLQENYNCEVVVFTADIGQE-DDMSVIQKKAAALNVKEIFIEDLKEEFVRDFVFPMFRANTIYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAHGATGKGNDQVRFEFGYYCCDPNIKVIAPWRQWELTSRHSLIEYARKNNINVPLDKVNEPPYSIDANLLHISYEGKSLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_EHRRG (Argininosuccinate synthase OS=Ehrlichia ruminantium (strain Gardel) GN=argG PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.967e-55
Identity = 101/184 (54.89%), Postives = 136/184 (73.91%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK--KSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+ENY CEVV FTAD+GQ   ++  +++KA A    ++ ++DLKEEFV+D++FP  RA  IYE  YLLGTS+ARP+IAK  +++A   GADAVAHG TGKGNDQVRFE  ++  +P + V+APWR+W++  R   IEYA+K+N+ VP+ K  +  YS D NL H+S+EG  LEDP
Sbjct:   12 LDTSVILKWLQENYNCEVVVFTADIGQE-DDMSVIQKKAAALNVKEIFIEDLKEEFVRDFVFPMFRANTIYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAHGATGKGNDQVRFEFGYYCCDPNIKVIAPWRQWELTSRHSLIEYARKNNINVPLDKVNEPPYSIDANLLHISYEGKSLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CAMC5 (Argininosuccinate synthase OS=Campylobacter curvus (strain 525.92) GN=argG PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 4.967e-55
Identity = 103/185 (55.68%), Postives = 137/185 (74.05%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP-VTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +EL+   +KA A G     + ++DL+EEFV+DY+FP  RA AIYE +YLLGTS+ARP+IAK   ++A+  GAD V+HG TGKGNDQVRFEL ++A+NP L V+ PWREWD+  RE  + YA+K+ + +     KS YS D NL H+S+EG +LEDP
Sbjct:   16 LDTSIILKWLQDEYKCEVVTFTADIGQG-EELEPARKKALALGVKPENIFIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIARPLIAKRQAEIAKLTGADGVSHGATGKGNDQVRFELAYYAINPNLKVIVPWREWDLNSREKLLAYAEKNGIDITRKPGKSPYSMDANLLHISYEGLVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DEIRA (Argininosuccinate synthase OS=Deinococcus radiodurans GN=argG PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 6.487e-55
Identity = 100/182 (54.95%), Postives = 135/182 (74.18%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+     +VVCFTAD+GQG  E++    KA  +GA      DL+EEFV+DY+FP +R+ A+YE  YLLGTS+ARP+IAK MV++A + GA A++HG TGKGNDQVRFE++ +AL P++  VAPWR+WD QGR D   +A++H +PVP TKK  +S D N+ H+S+EG  LEDP
Sbjct:   14 LDTSIILKWLQTERNYDVVCFTADLGQG-DEVEEARVKALNTGAVAAYALDLREEFVRDYVFPMMRSSALYEGYYLLGTSIARPLIAKKMVEIAEKEGAVAISHGATGKGNDQVRFEMSAYALKPDIVTVAPWRDWDFQGRADLEAFAREHGIPVPTTKKDPWSMDANMLHISYEGGPLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_POLSQ (Argininosuccinate synthase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=argG PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.472e-55
Identity = 105/187 (56.15%), Postives = 137/187 (73.26%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ YGCE+V FTAD+GQG +EL+    KA   G     + + DL+EEFV+D++FP  RA  IYE +YLLGTS+ARP+IAK  +++AR  GADAV+HG TGKGNDQVRFEL ++AL P + V+APWREWD+  RE  + YA+KH +PV +  K   S YS D NL H+S+EG  LE+P
Sbjct:   15 LDTSVILKWLQDTYGCEIVTFTADLGQG-EELEPARAKALQFGIKPENIFIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRQIEIARLTGADAVSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDLLSREKLMAYAEKHGIPVEMKHKQGGSPYSMDANLLHISYEGRHLENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_MAGSM (Argininosuccinate synthase OS=Magnetococcus sp. (strain MC-1) GN=argG PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.472e-55
Identity = 100/184 (54.35%), Postives = 132/184 (71.74%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKS--IYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV F AD+GQ  +EL+    KA+  G  ++ + DLKEEFV+D++FP  RA  +YE  Y LGTS+ARP+IAK  +++A   GA AV+HG TGKGNDQVRFEL ++AL P++ V+APWREWD+  R+    YA+KH +PVP  K+    YS DRNL H+S EG  LEDP
Sbjct:   16 LDTSIILKWLQDEYQCEVVAFCADLGQA-EELEPARAKAEKFGVKEIYIDDLKEEFVRDFVFPMYRANTLYEGVYHLGTSIARPLIAKRQIEIANATGAQAVSHGATGKGNDQVRFELGYYALRPDIRVIAPWREWDLTSRDKLFAYAEKHGIPVPTDKRGEVPYSMDRNLLHISFEGKALEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_GLUDA (Argininosuccinate synthase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=argG PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.472e-55
Identity = 100/184 (54.35%), Postives = 138/184 (75.00%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+  YGCEVV FTAD+GQG +EL+   +KA+  G  ++ V+DL+E FVKD++FP  RA  +YE +YLLGTS+ARP+IA+  +++A  VGADAVAHG TGKGNDQVRFEL ++AL P++ V++PWREWD+  R   + +A++H +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   17 LDTSVILRWLQTTYGCEVVTFTADLGQG-EELEPARKKAEMFGVKEIFVEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARPLIAQRQIEIAEAVGADAVAHGATGKGNDQVRFELAYYALKPDVTVISPWREWDLTSRTRLLAFAEEHQIPIAKDKRGEAPFSVDANLLHSSSEGKLLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHRVO (Argininosuccinate synthase OS=Chromobacterium violaceum GN=argG PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.472e-55
Identity = 101/186 (54.30%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++   +KA + G     + ++DL+EEFV+D+++P  RA  IYE +YLLGTS+ARP+IAK  +++A +VGADAV+HG TGKGNDQVRFEL ++AL P++ V+APWREWD+  RE  + YA+ H + +   K   S YS D NL H+S+EG +LEDP
Sbjct:   15 LDTSVILKWLQDEYQCEVVTFTADIGQG-EEVEPARQKAVSLGIKPENIFIEDLREEFVRDFVYPMFRANTIYEGEYLLGTSIARPLIAKRQIEIANQVGADAVSHGATGKGNDQVRFELGYYALKPDVKVIAPWREWDLLSREKLLAYAETHGIDISKKKNGGSPYSMDANLLHISYEGTVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_NITHX (Argininosuccinate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=argG PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.106e-54
Identity = 101/186 (54.30%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YG EVV FTAD+GQG +EL+   +KA   G     + ++DL+EEFV+DY+FP  RA A+YE +YLLGTS+ARP+IAK  +++A +VGADAV+HG TGKGNDQVRFEL ++AL P++ ++APWREWD + RE  I +A++H +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   16 LDTSIILKWLQTTYGAEVVTFTADLGQG-EELEPARQKALLLGIKPENIFIEDLREEFVRDYVFPMFRANAVYEGQYLLGTSIARPLIAKKQIEIAEKVGADAVSHGATGKGNDQVRFELGYYALKPDITIIAPWREWDFKSREKLIAFAEQHQIPIAKDKRGEAPFSVDANLLHASSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOAB (Argininosuccinate synthase OS=Clostridium acetobutylicum GN=argG PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.445e-54
Identity = 100/182 (54.95%), Postives = 132/182 (72.53%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV +PWL++NY  EV+    +VGQ   ++D ++EKA  SGA ++ V+D+KEEFV +Y++  ++  A YE KYLLGTS ARP+IAK +V+VA + GA  + HGCTGKGNDQVRFE    A++P + ++APWR W+I  RE  I+YA    V VPVTK+ IYS D NLWH+SHEG  LEDP
Sbjct:   13 LDTSVTIPWLKDNYDVEVIAVCVNVGQE-DDMDKVKEKAVNSGAAKIYVEDVKEEFVTEYLYNAIKWNATYEGKYLLGTSFARPLIAKKLVEVAHKEGAKYICHGCTGKGNDQVRFETAIAAMDPYIKIIAPWRLWNIDSREAEIDYALSKGVEVPVTKEKIYSEDWNLWHISHEGGDLEDP 193          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_EHRRW4.967e-5554.89Argininosuccinate synthase OS=Ehrlichia ruminantiu... [more]
ASSY_EHRRG4.967e-5554.89Argininosuccinate synthase OS=Ehrlichia ruminantiu... [more]
ASSY_CAMC54.967e-5555.68Argininosuccinate synthase OS=Campylobacter curvus... [more]
ASSY_DEIRA6.487e-5554.95Argininosuccinate synthase OS=Deinococcus radiodur... [more]
ASSY_POLSQ8.472e-5556.15Argininosuccinate synthase OS=Polynucleobacter sp.... [more]
ASSY_MAGSM8.472e-5554.35Argininosuccinate synthase OS=Magnetococcus sp. (s... [more]
ASSY_GLUDA8.472e-5554.35Argininosuccinate synthase OS=Gluconacetobacter di... [more]
ASSY_CHRVO8.472e-5554.30Argininosuccinate synthase OS=Chromobacterium viol... [more]
ASSY_NITHX1.106e-5454.30Argininosuccinate synthase OS=Nitrobacter hamburge... [more]
ASSY_CLOAB1.445e-5454.95Argininosuccinate synthase OS=Clostridium acetobut... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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