CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11611 contig Csv1_Contig11611:422..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSEA6 (Argininosuccinate synthase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=argG PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.646e-66
Identity = 115/182 (63.19%), Postives = 141/182 (77.47%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY CEV+ F ADVGQG +EL+GL EKA  +GA +  + DLK+EFV DYI+P +  GA+YE +YLLGTSMARP+IAKA V++AR+VGADA+ HGCTGKGNDQVRFE TF AL PEL V+APWREWD+  RED + Y  + ++    +   IYSRD N WH+SHEG  LEDP
Sbjct:   17 LDTSAIIPWLKENYDCEVIAFAADVGQGDEELEGLREKAIKTGASECYIVDLKDEFVSDYIYPTITTGAVYEGQYLLGTSMARPIIAKAQVEIARKVGADALCHGCTGKGNDQVRFEGTFAALAPELTVIAPWREWDMVSREDLLAYLAERDIKTTASATKIYSRDANAWHISHEGGELEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_HELMO (Argininosuccinate synthase (Fragment) OS=Heliobacillus mobilis GN=argG PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.149e-66
Identity = 118/182 (64.84%), Postives = 149/182 (81.87%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENYG EV+   AD+GQG +EL+ L EKA  +GA ++ ++D+KEEFV ++I+P L+AGA+YE KYLLGTS ARP+IAK +V++AR+ GA+A+AHG TGKGNDQVRFELT  AL P+L +VAPWREWDI+ REDAI+YA+  N+PVPV K   YS DRNLWHLSHEG  LE P
Sbjct:   19 LDTSIIIPWLKENYGYEVIAMAADLGQG-EELEPLNEKAINTGATKIYIEDVKEEFVTEFIWPTLKAGAVYEGKYLLGTSFARPLIAKRLVEIARKEGAEAIAHGATGKGNDQVRFELTVKALAPDLKIVAPWREWDIRSREDAIDYAQARNIPVPVKKDRPYSMDRNLWHLSHEGADLESP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNFM (Argininosuccinate synthase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=argG PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.666e-66
Identity = 114/182 (62.64%), Postives = 149/182 (81.87%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL E+YGCEVV F+AD+GQ  +ELDGLE KA A+GA +  + DL+EEFV+D++FP  RA AIYE +YLLGTS+ARP+IAKA + +A E  ADAV+HG TGKGNDQVRFELT+ ALNP + ++APWREWD++ R D +E+A++H +P+PVTK+  YS DRN+ H+S+EG ILEDP
Sbjct:   14 LDTSIILKWLIESYGCEVVAFSADLGQA-EELDGLEAKALATGAVKARIVDLREEFVRDFVFPAFRANAIYEGQYLLGTSIARPLIAKAQIRIAEEEDADAVSHGATGKGNDQVRFELTYIALNPAIKIIAPWREWDLKSRSDLVEFARRHGIPIPVTKEKPYSSDRNMLHISYEGGILEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHEAM (Argininosuccinate synthase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=argG PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.666e-66
Identity = 120/183 (65.57%), Postives = 141/183 (77.05%), Query Frame = -1
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY  CE+V F ADVGQG +EL GL EKA ASGA +  + DLKEEFVKDYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADA+ HGCTGKGNDQVRFE  F AL P+L V+APWREWD++ RED + Y  + N+    +   IYSRD N WH+SHEG  LEDP
Sbjct:   21 LDTSAIIPWLKENYDNCEIVAFCADVGQGEEELVGLTEKALASGASECHIVDLKEEFVKDYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWDMESREDLLAYLAERNIKTSASATKIYSRDANAWHISHEGGELEDP 203          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOTH (Argininosuccinate synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=argG PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.666e-66
Identity = 120/182 (65.93%), Postives = 146/182 (80.22%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENY  EV+   ADVGQG +EL+ L EKA  +GA ++ ++DLKEEFV D+IFP L+AGA+YE KYLLGTS ARP+IAK MV++A + GA AVAHG TGKGNDQVRFELT  AL P L ++APWR WDI+ RED IEYA+  N+P+PV+K+  YS DRNLWHLSHEG  LEDP
Sbjct:   15 LDTSIIIPWLKENYDYEVIAMAADVGQG-EELEPLREKAIKTGASKIYIEDLKEEFVTDFIFPTLKAGAVYEGKYLLGTSFARPLIAKRMVEIALKEGATAVAHGATGKGNDQVRFELTVKALAPHLKIIAPWRIWDIKSREDEIEYAQARNIPIPVSKEDNYSMDRNLWHLSHEGLDLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THETN (Argininosuccinate synthase OS=Thermoanaerobacter tengcongensis GN=argG PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.254e-66
Identity = 115/182 (63.19%), Postives = 149/182 (81.87%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+PWL+ENY CE++    DVGQ  ++L  +++KA ASGA ++ ++D+KEEFVKDYIFP L+AGAIYE KYLLGTSMARP+IAK +V++A + GA A+AHG TGKGNDQVRFE++  AL+P + ++APWR W+++ RED IEYAKK  +P+PVTK+ IYS D NLWH+SHEG  LEDP
Sbjct:   15 LDTSVIIPWLKENYECEIIAVCVDVGQR-EDLRYIKDKALASGASKVYIEDVKEEFVKDYIFPTLKAGAIYEGKYLLGTSMARPLIAKKLVEIAHKEGAKAIAHGATGKGNDQVRFEVSIRALDPSIKIIAPWRIWELKSREDEIEYAKKKGIPIPVTKEKIYSVDSNLWHVSHEGGDLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THEP3 (Argininosuccinate synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=argG PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.393e-65
Identity = 113/182 (62.09%), Postives = 148/182 (81.32%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+PWL+ENY CE++    +VGQG +EL  +++KA ASGA ++ ++D+KEEFVKDYIFP L+AGA+YE KYLLGTSMARP+IAK +V++A + GA A+AHG TGKGNDQVRFE++  AL+P + ++APWR WD++ RED I+YAKK  +P+P T + IYS D NLWH+SHEG  LEDP
Sbjct:   15 LDTSVIIPWLKENYECEIIAACINVGQG-EELKYIKDKALASGASKVYIEDVKEEFVKDYIFPTLKAGAVYEGKYLLGTSMARPLIAKKLVEIAHKEGAKAIAHGATGKGNDQVRFEVSIHALDPSIKIIAPWRIWDLKSREDEIDYAKKKGIPIPATYEKIYSVDNNLWHVSHEGGDLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DESHY (Argininosuccinate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=argG PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.393e-65
Identity = 117/182 (64.29%), Postives = 147/182 (80.77%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENYG EV+   AD+GQG +EL+ L EKA  SGA +L ++DL+EEFV D+I+P L+AGA+YE KYLLGTS ARP+IA+ +V++A + GA A+AHG TGKGNDQVRFEL   ALNP+L ++APWR WDI+ REDAI+YA +  +PVPVTK   YS DRN+WHLSHEG  LEDP
Sbjct:   20 LDTSIIIPWLKENYGYEVIAMAADLGQG-EELEPLHEKAIKSGASKLYIEDLQEEFVTDFIYPTLKAGAVYEGKYLLGTSFARPLIAQRLVEIAAKEGAVAIAHGATGKGNDQVRFELAVKALNPDLEIIAPWRIWDIKSREDAIDYAVERGIPVPVTKDRPYSMDRNVWHLSHEGGDLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DESHD (Argininosuccinate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=argG PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.393e-65
Identity = 117/182 (64.29%), Postives = 147/182 (80.77%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENYG EV+   AD+GQG +EL+ L EKA  SGA +L ++DL+EEFV D+I+P L+AGA+YE KYLLGTS ARP+IA+ +V++A + GA A+AHG TGKGNDQVRFEL   ALNP+L ++APWR WDI+ REDAI+YA +  +PVPVTK   YS DRN+WHLSHEG  LEDP
Sbjct:   12 LDTSIIIPWLKENYGYEVIAMAADLGQG-EELEPLHEKAIKSGASKLYIEDLQEEFVTDFIYPTLKAGAVYEGKYLLGTSFARPLIAQRLVEIAAKEGAVAIAHGATGKGNDQVRFELAVKALNPDLEIIAPWRIWDIKSREDAIDYAVERGIPVPVTKDRPYSMDRNVWHLSHEGGDLEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_MORPR (Argininosuccinate synthase OS=Moritella profunda GN=argG PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.104e-65
Identity = 115/183 (62.84%), Postives = 142/183 (77.60%), Query Frame = -1
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+PWL+ENY  CE+V F ADVGQG +EL+G+E KA ASGA +  V DLK+E V++YI+P L+ GA+YE  YLLGTSMARP+IAKA V++AR+VGADA+ HGCTGKGNDQ+RFE  F AL PEL V+APWR WD+  RE  +EY  + ++P   +   IYSRD N WH+SHEG  LEDP
Sbjct:   18 LDTSVILPWLQENYDNCEIVAFVADVGQGAEELEGIEAKALASGASECYVVDLKDELVENYIYPTLKTGAVYEGTYLLGTSMARPIIAKAQVEIARKVGADALCHGCTGKGNDQIRFESCFAALAPELTVIAPWRIWDLTSRESLLEYLAERDIPTAASATKIYSRDANAWHISHEGGELEDP 200          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_PSEA61.646e-6663.19Argininosuccinate synthase OS=Pseudoalteromonas at... [more]
ASSY_HELMO2.149e-6664.84Argininosuccinate synthase (Fragment) OS=Heliobaci... [more]
ASSY_SYNFM3.666e-6662.64Argininosuccinate synthase OS=Syntrophobacter fuma... [more]
ASSY_SHEAM3.666e-6665.57Argininosuccinate synthase OS=Shewanella amazonens... [more]
ASSY_CLOTH3.666e-6665.93Argininosuccinate synthase OS=Clostridium thermoce... [more]
ASSY_THETN6.254e-6663.19Argininosuccinate synthase OS=Thermoanaerobacter t... [more]
ASSY_THEP31.393e-6562.09Argininosuccinate synthase OS=Thermoanaerobacter p... [more]
ASSY_DESHY1.393e-6564.29Argininosuccinate synthase OS=Desulfitobacterium h... [more]
ASSY_DESHD1.393e-6564.29Argininosuccinate synthase OS=Desulfitobacterium h... [more]
ASSY_MORPR3.104e-6562.84Argininosuccinate synthase OS=Moritella profunda G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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