CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BRUA1 (Argininosuccinate synthase OS=Brucella abortus (strain S19) GN=argG PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.887e-54
Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG +EL+   +KA+  G  ++ ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K ++D+A++ GADA+AHG TGKGNDQVRFEL+ +ALNP++ ++APWR+W  + R   +E+A++H +PV   KK  + +S D NL H S EG +LEDP
Sbjct:   18 LDTSIILKWLQTELGAEVVTFTADLGQG-EELEPARKKAEMLGIKEIFIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIAKKTGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWSFKSRTQLLEFAEQHQIPVAKDKKGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BARBK (Argininosuccinate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=argG PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.465e-54
Identity = 98/184 (53.26%), Postives = 139/184 (75.54%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK--KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG +EL+    KA+  G  ++ ++DL+EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K ++++A+E GADA+AHG TGKGNDQVRFEL+ +AL+P++ ++APWR+W  + R D IE+A+ H +PV   K  ++ +S D NL H S EG ILE+P
Sbjct:   18 LDTSIILKWLQSELGAEVVTFTADLGQG-EELESARRKAEIMGIKEIYIEDLREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKRLIEIAKETGADAIAHGATGKGNDQVRFELSAYALDPDIKIIAPWRDWTFKSRTDLIEFARVHQIPVEKDKEGEAPFSVDANLLHSSSEGKILENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_OCHA4 (Argininosuccinate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=argG PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.219e-54
Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG +EL+   +KA+  G  ++ ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K ++++AR+ GADA+AHG TGKGNDQVRFEL+ +ALNP++ ++APWR+W  + R   +E+A++H +PV   KK  + +S D NL H S EG +LEDP
Sbjct:   18 LDTSIILKWLQTELGAEVVTFTADLGQG-EELEPARKKAEMLGIKEIFIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIEIARKTGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWSFKSRTHLLEFAEQHQIPVAKDKKGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_METSB (Argininosuccinate synthase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=argG PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.219e-54
Identity = 101/186 (54.30%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL   YGCEVV FTAD+GQG +E++   +KA   G     + ++DL+EEFV+DY+FP  RA A YE  YLLGTS+ARP+IAK  +++A++ GADAVAHG TGKGNDQVRFEL+++AL+P++ V+APWREWD+  R   I +A++H +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   19 LDTSIILKWLETTYGCEVVTFTADLGQG-EEIEPARQKAILLGVKPENIFIEDLREEFVRDYVFPMFRANAQYEGLYLLGTSIARPLIAKKQIEIAKKTGADAVAHGATGKGNDQVRFELSYYALDPDIKVIAPWREWDLTSRTALIAFAEQHQIPIAKDKRGDAPFSVDANLLHASSEGKVLEDP 203          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DESDG (Argininosuccinate synthase OS=Desulfovibrio desulfuricans (strain G20) GN=argG PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.219e-54
Identity = 102/183 (55.74%), Postives = 136/183 (74.32%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPV-PVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ W+ + Y CEVV  TAD+GQ  ++LDG++EKA  +GA +  V+DL+EEF +D+IFP +RA AIYE +YLLGTS+ARP+I + +V++A   GA AVAHG TGKGNDQVRFEL   AL+P L V+APWREWD + R D + +A ++++PV     + +YS DRN+ H S EG  LEDP
Sbjct:   16 LDTSVILKWIAKTYDCEVVTLTADLGQE-EDLDGVDEKALRTGATRAYVEDLREEFARDFIFPMMRACAIYEGRYLLGTSIARPLITRRLVEIAHAEGAQAVAHGATGKGNDQVRFELASAALDPSLKVIAPWREWDFRSRTDLLNFAAENDIPVISAGNRKLYSMDRNMLHCSFEGGELEDP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHIEC (Argininosuccinate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=argG PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.205e-54
Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG +EL+   +KA+  G  ++ ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K ++D+AR+ GADA+AHG TGKGNDQVRFEL+ +ALNP++ ++APWR+W  + R + + +A++H +PV   KK  + +S D NL H S EG +LEDP
Sbjct:   18 LDTSIILKWLQTELGAEVVTFTADLGQG-EELEPARKKAEMLGIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWAFKSRTELLAFAEQHQIPVAKDKKGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROVI (Argininosuccinate synthase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=argG PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.205e-54
Identity = 101/182 (55.49%), Postives = 135/182 (74.18%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++ WL++ YG +VV  T ++GQ  KE++GLEEKA ++GA      DLK++FV+DYI+  L+AGA+YE  Y L T++ RP++AKAMVDVA E     +AHGCTGKGNDQVRFE+TF +L P + V+AP REW+   RE  ++YA KHN+PV VTKKS YS D N+W +S E  +LEDP
Sbjct:   14 LDTSIMIKWLKDKYGADVVAITGNLGQQ-KEIEGLEEKAVSTGASSFHFVDLKKQFVEDYIWRALKAGALYEDVYPLATALGRPLLAKAMVDVALEENCTMLAHGCTGKGNDQVRFEVTFASLAPNMKVLAPLREWEFTSRESEMDYAIKHNIPVSVTKKSPYSIDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AGRT5 (Argininosuccinate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=argG PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 4.205e-54
Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG +EL+   +KA+  G  ++ V+D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K ++++A++ GADA+AHG TGKGNDQVRFEL+ +ALNP++ ++APWR+W  + R D + +A++H +PV   KK  + +S D NL H S EG +LEDP
Sbjct:   18 LDTSIILKWLQTELGAEVVTFTADLGQG-EELEPARKKAEMLGIKEIFVEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIEIAKKTGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWTFKSRTDLLNFAEQHQIPVAKDKKGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SILPO (Argininosuccinate synthase OS=Silicibacter pomeroyi GN=argG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.172e-54
Identity = 102/186 (54.84%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEVV FTAD+GQG +EL+   +KA+  G     + ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K +V++A E GADAVAHG TGKGNDQVRFEL+ +ALNPE+ V+APWR WD+  R   +E+A+ H +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   15 LDTSIILKWLQTEYGCEVVTFTADLGQG-EELEPARKKAELLGIKPENIHIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAAEHGADAVAHGATGKGNDQVRFELSAYALNPEIRVIAPWRLWDLTSRTRLLEFAEAHQIPISKDKRGEAPFSVDANLLHTSSEGKVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_GRABC (Argininosuccinate synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=argG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.172e-54
Identity = 100/184 (54.35%), Postives = 136/184 (73.91%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+  Y CEVV FTAD+GQG +EL+    KA+  G  ++ V DL+E FVKD++FP  RA A+YE +YLLGTS+ARP+IA+  +++A   GADAVAHG TGKGNDQVRFEL+++AL P++ V+APWREWD+  R   +E+A+ + +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   24 LDTSVILRWLQTTYNCEVVTFTADLGQG-EELEPARRKAEMFGVKEIFVDDLRETFVKDFVFPMFRANAVYEGQYLLGTSIARPLIAQRQIEIAELTGADAVAHGATGKGNDQVRFELSYYALKPDVKVIAPWREWDLTSRTKLLEFAEANQIPIAKDKRGEAPFSVDANLLHSSSEGKLLEDP 206          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_BRUA11.887e-5452.72Argininosuccinate synthase OS=Brucella abortus (st... [more]
ASSY_BARBK2.465e-5453.26Argininosuccinate synthase OS=Bartonella bacillifo... [more]
ASSY_OCHA43.219e-5452.72Argininosuccinate synthase OS=Ochrobactrum anthrop... [more]
ASSY_METSB3.219e-5454.30Argininosuccinate synthase OS=Methylocella silvest... [more]
ASSY_DESDG3.219e-5455.74Argininosuccinate synthase OS=Desulfovibrio desulf... [more]
ASSY_RHIEC4.205e-5452.72Argininosuccinate synthase OS=Rhizobium etli (stra... [more]
ASSY_PROVI4.205e-5455.49Argininosuccinate synthase OS=Prosthecochloris vib... [more]
ASSY_AGRT54.205e-5452.72Argininosuccinate synthase OS=Agrobacterium tumefa... [more]
ASSY_SILPO7.172e-5454.84Argininosuccinate synthase OS=Silicibacter pomeroy... [more]
ASSY_GRABC7.172e-5454.35Argininosuccinate synthase OS=Granulibacter bethes... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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