CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ERYLH (Argininosuccinate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=argG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.172e-54
Identity = 105/186 (56.45%), Postives = 137/186 (73.66%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI  WL    G EVV FTAD+GQG +EL+    KA+A G     + ++DL+EEFV+DY+FP +RA A YE  YLLGTS+ARP+I+K +V++A+E GADA+AHG TGKGNDQVRFEL+ +AL+P++ V+APWREWD+  R   I +A+KH + VP  K+  S +S D NL H S EG +LEDP
Sbjct:   15 LDTSVIAKWLEVERGLEVVTFTADLGQG-EELEPARAKAQAMGIPDKHIFIEDLREEFVRDYVFPMMRANARYEGDYLLGTSIARPLISKRLVEIAQETGADAIAHGATGKGNDQVRFELSAYALDPDIKVIAPWREWDLTSRTALIAWAEKHQIQVPKDKRGESPFSTDANLLHTSSEGKVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CAMFF (Argininosuccinate synthase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=argG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.172e-54
Identity = 102/185 (55.14%), Postives = 138/185 (74.59%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK-KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +E++   +KA + G     + ++DL+EEFVKD++FP  RA AIYE +YLLGTS+ARP+IAK +V++A    AD V+HG TGKGNDQVRFE+  +ALNP + V+APWREWD+  RE  + YA+K+ + +   K KS YS D NL H+S+EG +LEDP
Sbjct:   17 LDTSIILKWLQDEYKCEVVTFTADIGQG-EEVEPARKKAISLGIKPENIFIEDLREEFVKDFVFPMFRANAIYEGEYLLGTSIARPLIAKRLVEIAAATKADCVSHGATGKGNDQVRFEIGAYALNPNIKVIAPWREWDLNSREKLLAYAEKNGIDISKKKGKSPYSMDANLLHISYEGLVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AZOSB (Argininosuccinate synthase OS=Azoarcus sp. (strain BH72) GN=argG PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.172e-54
Identity = 104/187 (55.61%), Postives = 136/187 (72.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +EL+   +KA   G     + + DL+EEFV+D++FP  RA  IYE +YLLGTS+ARP+IAK  +++AR  GADAV+HG TGKGNDQVRFEL ++AL P + V+APWREWD+  RE  + YA+KH +P+ +  K   S YS D NL H+S EG  LE+P
Sbjct:   15 LDTSVILKWLQDTYQCEVVTFTADLGQG-EELEPARQKALKFGIKPENIFIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGADAVSHGATGKGNDQVRFELGYYALMPGVKVIAPWREWDLLSREKLLAYAEKHGIPIEMKHKQGGSPYSMDANLLHISFEGRHLENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_XANP2 (Argininosuccinate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=argG PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.367e-54
Identity = 100/186 (53.76%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+  Y CEV+ FTAD+GQG +EL+   +KA+  G     + ++D++EEFV +Y+FP  RA A+YE  YLLGTS+ARP+IAK  +++AR++GADAV+HG TGKGNDQVRFEL ++AL PE+ V+APWREWD+  R   +E+A++H +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   16 LDTSVILKWLQTTYKCEVITFTADLGQG-EELEPARKKAQLLGIKDENIFIEDVREEFVAEYVFPMFRANAVYEGLYLLGTSIARPLIAKKQIEIARKMGADAVSHGATGKGNDQVRFELGYYALEPEITVIAPWREWDLTSRTRLLEFAEQHQIPIAKDKRGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHOCS (Argininosuccinate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=argG PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.367e-54
Identity = 101/186 (54.30%), Postives = 136/186 (73.12%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+E Y CEVV FTAD+GQG +EL+    KA+  G     + + DL+EEFV+D++FP  RA  +YE  YLLGTS+ARP+I+K  +++A  VGADAVAHG TGKGNDQVRFEL ++AL P++ V+APWREW +  R   +++A+KH +P+   K+  + YS D NL H+S+EG  LEDP
Sbjct:   16 LDTSVILKWLQETYRCEVVTFTADLGQG-EELEPARAKAQMLGIRPENIFIDDLREEFVRDFVFPMFRANTLYEGTYLLGTSIARPLISKRQIEIANLVGADAVAHGATGKGNDQVRFELGYYALKPDVRVIAPWREWQLNSRTALLDFAEKHQIPIAKDKRGEAPYSTDANLLHISYEGKALEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHILO (Argininosuccinate synthase OS=Rhizobium loti GN=argG PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.367e-54
Identity = 100/184 (54.35%), Postives = 135/184 (73.37%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG  EL+   +KA+  G   + + D++EEFV D++FP  RA  +YE  YLLGTS+ARP+I+K +VD+ARE GADA+AHG TGKGNDQVRFEL+ +ALNP++ V+APWR+W  + R D I +A++H +PV   K+  + +S D NL H S EG +LEDP
Sbjct:   18 LDTSIILKWLQTELGAEVVTFTADLGQG-GELEPARKKAEMMGIKDIRIVDVREEFVADFVFPMFRANTVYEGTYLLGTSIARPLISKHLVDIARETGADAIAHGATGKGNDQVRFELSAYALNPDIKVIAPWRDWSFKSRTDLINFAEQHQIPVAKDKRGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY2_RHIL3 (Argininosuccinate synthase 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=argG2 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.367e-54
Identity = 96/184 (52.17%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK--KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+   G EVV FTAD+GQG +EL+   +KA+  G  ++ ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K ++D+A++ GADA+AHG TGKGNDQVRFEL+ +ALNP++ ++APWR+W  + R D + +A++H +PV   K  ++ +S D NL H S EG +LEDP
Sbjct:   18 LDTSIILKWLQTELGAEVVTFTADLGQG-EELEPARKKAEMLGIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIAKKTGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWAFKSRTDLLAFAEQHQIPVAKDKMGEAPFSVDANLLHSSSEGKVLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ACICJ (Argininosuccinate synthase OS=Acidiphilium cryptum (strain JF-5) GN=argG PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.223e-53
Identity = 102/184 (55.43%), Postives = 135/184 (73.37%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+   G EVV FTAD+GQG +EL+    KA+  G  ++ V+DL+E FVKD++FP  RA A+YE +YLLGTS+ARP+IA+  +++A  VGADAVAHG TGKGNDQVRFEL ++AL P++ VVAPWREW +  R   +E+A+ H +P+   K+  + +S D NL H S EG ILEDP
Sbjct:   17 LDTSVILRWLQTERGAEVVTFTADLGQG-EELEPARRKAEMFGVKEIFVEDLRETFVKDFVFPMFRANALYEGQYLLGTSIARPLIAQRQIEIAEAVGADAVAHGATGKGNDQVRFELAYYALKPDVKVVAPWREWSLTSRTKLLEFAEAHQIPIAKDKRGEAPFSVDANLLHSSSEGKILEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SILST (Argininosuccinate synthase OS=Silicibacter sp. (strain TM1040) GN=argG PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.598e-53
Identity = 99/186 (53.23%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEVV FTAD+GQG +EL+   +KA+  G     + ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K +V++A   GADAV+HG TGKGNDQVRFEL+ +ALNP++ V+APWREWD+  R   +E+A+ + +P+   K+  + +S D NL H S EG +LEDP
Sbjct:   15 LDTSIILKWLQTEYGCEVVTFTADLGQG-EELEPARKKAELLGIKPENIFIEDIREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADAVSHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDLTSRTKLLEFAEANQIPIAKDKRGEAPFSVDANLLHTSSEGKVLEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHOSK (Argininosuccinate synthase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=argG PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.598e-53
Identity = 101/186 (54.30%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEVV FTAD+GQG +EL+   EKA   G     + ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+IAK +V++A + GADAVAHG TGKGNDQVRFELT +AL+P + V+APWREWD+  R   +E+A+++ +P+   K+  + +S D NL H S EG +LE+P
Sbjct:   15 LDTSIILKWLQTEYGCEVVTFTADLGQG-EELEPAREKAVMLGIKPENIFIEDVREEFVRDFVFPMFRANALYEGLYLLGTSIARPLIAKRLVEIAAQTGADAVAHGATGKGNDQVRFELTAYALDPAIKVIAPWREWDLTSRTKLLEFAEQNQIPIAKNKRGEAPFSVDANLLHTSSEGRVLENP 199          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_ERYLH7.172e-5456.45Argininosuccinate synthase OS=Erythrobacter litora... [more]
ASSY_CAMFF7.172e-5455.14Argininosuccinate synthase OS=Campylobacter fetus ... [more]
ASSY_AZOSB7.172e-5455.61Argininosuccinate synthase OS=Azoarcus sp. (strain... [more]
ASSY_XANP29.367e-5453.76Argininosuccinate synthase OS=Xanthobacter autotro... [more]
ASSY_RHOCS9.367e-5454.30Argininosuccinate synthase OS=Rhodospirillum cente... [more]
ASSY_RHILO9.367e-5454.35Argininosuccinate synthase OS=Rhizobium loti GN=ar... [more]
ASSY2_RHIL39.367e-5452.17Argininosuccinate synthase 2 OS=Rhizobium legumino... [more]
ASSY_ACICJ1.223e-5355.43Argininosuccinate synthase OS=Acidiphilium cryptum... [more]
ASSY_SILST1.598e-5353.23Argininosuccinate synthase OS=Silicibacter sp. (st... [more]
ASSY_RHOSK1.598e-5354.30Argininosuccinate synthase OS=Rhodobacter sphaeroi... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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