CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BART1 (Argininosuccinate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=argG PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.725e-53
Identity = 96/184 (52.17%), Postives = 137/184 (74.46%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTK--KSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+     EVV FTAD+GQG +EL+    KA+  G  ++ ++DL+EEFV+D++FP  RA  +YE  YLLGTS+ARP+I+K ++++A+E GADA+AHG TGKGNDQVRFEL+ +ALNP++ ++APWR+WD + R D  E+A+ H +PV   +  ++ +S D NL H S EG ILE+P
Sbjct:   18 LDTSIILKWLQSTLDAEVVTFTADLGQG-EELELARRKAEMLGVKEIYIEDLREEFVRDFVFPMFRANTVYEGAYLLGTSIARPLISKRLIEIAKETGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWDFKSRTDLFEFARMHQIPVEKDQQGEAPFSVDANLLHSSSEGKILENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AZOSE (Argininosuccinate synthase OS=Azoarcus sp. (strain EbN1) GN=argG PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.725e-53
Identity = 102/187 (54.55%), Postives = 135/187 (72.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +EL+   +KA   G     + + DL+EEFV+D++FP  R   +YE +YLLGTS+ARP+IAK  +++AR  GADAV+HG TGKGNDQVRFEL ++AL P + V+APWREWD+  RE  + YA+KH +P+ +  K   S YS D NL H+S EG  LE+P
Sbjct:   15 LDTSVILKWLQDTYQCEVVTFTADLGQG-EELEPARQKALKFGIKPDNIFIDDLREEFVRDFVFPMFRCNTVYEGEYLLGTSIARPLIAKRQIEIARATGADAVSHGATGKGNDQVRFELGYYALMPGVKVIAPWREWDLLSREKLLAYAEKHGIPIEMKHKQGGSPYSMDANLLHISFEGRHLENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHOS5 (Argininosuccinate synthase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=argG PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.559e-53
Identity = 102/186 (54.84%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEVV FTAD+GQG +EL+   EKA   G     + ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+IAK +V++A   GADAVAHG TGKGNDQVRFELT +AL+P + V+APWREWD+  R   IE+A+++ +P+   K+  + +S D NL H S EG +LE+P
Sbjct:   15 LDTSIILKWLQTEYGCEVVTFTADLGQG-EELEPAREKAVMLGIKPDNIFIEDVREEFVRDFVFPMFRANALYEGLYLLGTSIARPLIAKRLVEIAAMTGADAVAHGATGKGNDQVRFELTAYALDPAIKVIAPWREWDLTSRTRLIEFAEQNQIPIAKNKRGEAPFSVDANLLHTSSEGRVLENP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_POLNS (Argininosuccinate synthase OS=Polynucleobacter necessarius (strain STIR1) GN=argG PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.559e-53
Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ YGCE+V FTAD GQG +EL+    KA   G     + + DL EEFV+D++FP  RA  IYE +YLLGTS+ARP+IAK  +++AR  GAD+V+HG TGKGNDQVRFEL ++AL P + V+ PWREWD+  RE  + YA+KH +PV +  K   S YS D NL H+S+EG  LE+P
Sbjct:   15 LDTSVILKWLQDTYGCEIVTFTADFGQG-EELEPARAKALQFGIKPENIFIDDLCEEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRQIEIARLTGADSVSHGATGKGNDQVRFELGYYALEPGIKVIVPWREWDLLSREKLMAYAEKHGIPVEMRHKQGGSPYSMDANLLHISYEGRHLENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SULDN (Argininosuccinate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=argG PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 6.072e-53
Identity = 103/185 (55.68%), Postives = 133/185 (71.89%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT-KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KA A G     + + DL+EEFVKDY+FP  RA AIYE +YLLGTS+ARP+IAK  V++A    AD V+HG TGKGNDQVRFE+ + + +  L V+APWREWD+  RE  + YA++H + +    KKS YS D NL H+S+EG ILEDP
Sbjct:   16 LDTSVILKWLQDEYKCEVVTFTADIGQG-EEVEPARAKALALGIKPENIFIDDLREEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAKRQVEIAHLTNADGVSHGATGKGNDQVRFEMGYLSKDSTLTVIAPWREWDLNSREKLLAYAEEHGIQIEKKGKKSPYSMDANLLHISYEGGILEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BURXL (Argininosuccinate synthase OS=Burkholderia xenovorans (strain LB400) GN=argG PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.036e-52
Identity = 102/187 (54.55%), Postives = 135/187 (72.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++NY  EVV FTAD+GQG +EL+   +KA   G     + ++DL+EEFV+D++FP  RA  IYE +YLLGTS+ARP+IAK  +++AR  GA AV+HG TGKGNDQVRFEL ++AL P + V+APWREWD+  RE  + YA+K  +P+ +  K   + YS D NL H+S EG  LEDP
Sbjct:   15 LDTSVILKWLQDNYDAEVVTFTADIGQG-EELEPARKKALQLGIKPENIFIEDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQAVSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDLLSREKLLAYAEKAGIPIEMKHKQGGAPYSMDANLLHISFEGRHLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PELUB (Argininosuccinate synthase OS=Pelagibacter ubique GN=argG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.353e-52
Identity = 98/184 (53.26%), Postives = 133/184 (72.28%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSI--YSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+ENY  EV+C+TADVGQ I +   + + AK  G   ++++DLK+ FVKDY+FP +R  AIYE  YLLGTS+ARP+IAK  +  A++ GA AV+HG TGKGNDQVRFEL +    P++ ++APWR W +  R D I+YAKK+N+P+P  KK    +S D NL+H S EG +LE+P
Sbjct:   15 LDTSIILKWLQENYDAEVICYTADVGQEI-DRKKIIKNAKRLGVKNIIIEDLKDTFVKDYVFPMIRGHAIYEGVYLLGTSIARPLIAKRQIAAAKKFGAYAVSHGSTGKGNDQVRFELGYHYFGPKVKIIAPWRIWKLNSRTDLIKYAKKNNIPIPTDKKGAPPFSIDDNLYHTSTEGKVLENP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DECAR (Argininosuccinate synthase OS=Dechloromonas aromatica (strain RCB) GN=argG PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.353e-52
Identity = 100/187 (53.48%), Postives = 134/187 (71.66%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK---SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +EL+    KA  +G     + + D++EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK ++++  E GADA+ HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  + YA+KH + + +  K   S YS D NL H+S+EG  LEDP
Sbjct:   15 LDTSVILKWLQDVYKCEVVTFTADLGQG-EELEPARAKALKAGIKPKNIYIDDVREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIVNETGADAICHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDLMSREKLMAYAEKHGIEIDMKHKKGGSPYSMDANLLHISYEGRHLEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ARCB4 (Argininosuccinate synthase OS=Arcobacter butzleri (strain RM4018) GN=argG PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.307e-52
Identity = 104/192 (54.17%), Postives = 137/192 (71.35%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPV--------TKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y  EV+ FTAD+GQG +E++   +KA A G     + + D+KEEFVKDY+FP  RA AIYE +YLLGTS+ARP+IAK +V++A + GA+AV+HG TGKGNDQVRFEL   ALNP+L V+APWREW +  RE  +EYAKK+ + +           K S YS D NL H+S+EG  LE+P
Sbjct:   17 LDTSIILKWLQDEYNAEVITFTADLGQG-EEVEPARQKAIACGIKPENVFILDIKEEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAKKLVEIANQKGAEAVSHGATGKGNDQVRFELGALALNPDLKVIAPWREWTLNSRESLLEYAKKNGIEISQKHVDENGNPKISPYSMDANLLHISYEGLHLENP 207          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEGPH (Argininosuccinate synthase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=argG PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.140e-52
Identity = 95/183 (51.91%), Postives = 137/183 (74.86%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++PWL+E+Y   EV+    D+GQ  ++LD ++ KA  SGA +  V D+K EF   Y++P +++GA+YE +Y+LGT ++RP+IA+ +V++A     +AVAHG TGKGNDQVRFE +  AL P+L ++APWR WDI+ R++AI YAK H + VPVT K+ YSRD N+W++SHEG +LEDP
Sbjct:   16 LDTSIMIPWLKEHYEHAEVIAVICDLGQQ-EDLDAIKNKALKSGASKAYVVDVKNEFATQYLWPLVKSGALYEDQYILGT-ISRPLIAQKLVEIALTEQVNAVAHGATGKGNDQVRFEYSIKALAPQLEIIAPWRTWDIKSRQEAIVYAKAHGIEVPVTPKAPYSRDHNIWYISHEGGVLEDP 196          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_BART12.725e-5352.17Argininosuccinate synthase OS=Bartonella tribocoru... [more]
ASSY_AZOSE2.725e-5354.55Argininosuccinate synthase OS=Azoarcus sp. (strain... [more]
ASSY_RHOS53.559e-5354.84Argininosuccinate synthase OS=Rhodobacter sphaeroi... [more]
ASSY_POLNS3.559e-5355.08Argininosuccinate synthase OS=Polynucleobacter nec... [more]
ASSY_SULDN6.072e-5355.68Argininosuccinate synthase OS=Sulfurimonas denitri... [more]
ASSY_BURXL1.036e-5254.55Argininosuccinate synthase OS=Burkholderia xenovor... [more]
ASSY_PELUB1.353e-5253.26Argininosuccinate synthase OS=Pelagibacter ubique ... [more]
ASSY_DECAR1.353e-5253.48Argininosuccinate synthase OS=Dechloromonas aromat... [more]
ASSY_ARCB42.307e-5254.17Argininosuccinate synthase OS=Arcobacter butzleri ... [more]
ASSY_LEGPH5.140e-5251.91Argininosuccinate synthase OS=Legionella pneumophi... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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