CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LAWIP (Argininosuccinate synthase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=argG PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.713e-52
Identity = 99/182 (54.40%), Postives = 131/182 (71.98%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL   Y CEV+  TAD+GQ  +    +EEKA  +GA +  V DL+ EF K++IFP LRA AIYE +YLLGT++ARP+I K ++D+AR   ADA+AHG TGKGNDQVRFEL   AL P+++V+APWREWD+  R     +A+KHN+P+  + K  YS+D+N+ H S EG  LE+P
Sbjct:   16 LDTSVILKWLIATYNCEVIAVTADLGQN-ENFHDIEEKAIVTGASKAYVVDLRNEFAKNFIFPMLRASAIYEGRYLLGTAIARPLITKLLIDIARAEEADAIAHGATGKGNDQVRFELAAAALAPDIHVIAPWREWDLISRTALTTFAEKHNIPISTSHKR-YSKDQNMLHCSIEGSELENP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEGPL (Argininosuccinate synthase OS=Legionella pneumophila (strain Lens) GN=argG PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.767e-52
Identity = 95/183 (51.91%), Postives = 137/183 (74.86%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++PWL+E+Y   EV+    D+GQ  ++LD ++ KA  SGA +  V D+K EF   Y++P +++GA+YE +Y+LGT ++RP+IA+ +V++A     +AVAHG TGKGNDQVRFE +  AL P+L ++APWR WDI+ R++AI YAK H + VPVT K+ YSRD N+W++SHEG +LEDP
Sbjct:   16 LDTSIMIPWLKEHYEHAEVIAVICDLGQQ-EDLDAIKNKALKSGASKAYVVDVKNEFAIQYLWPLVKSGALYEDQYILGT-ISRPLIAQKLVEIALTEQVNAVAHGATGKGNDQVRFEYSLKALAPQLEIIAPWRAWDIKSRQEAIVYAKAHGIEVPVTPKAPYSRDHNIWYISHEGGVLEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEGPA (Argininosuccinate synthase OS=Legionella pneumophila (strain Paris) GN=argG PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.767e-52
Identity = 95/183 (51.91%), Postives = 137/183 (74.86%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++PWL+E+Y   EV+    D+GQ  ++LD ++ KA  SGA +  V D+K EF   Y++P +++GA+YE +Y+LGT ++RP+IA+ +V++A     +AVAHG TGKGNDQVRFE +  AL P+L ++APWR WDI+ R++AI YAK H + VPVT K+ YSRD N+W++SHEG +LEDP
Sbjct:   16 LDTSIMIPWLKEHYEHAEVIAVICDLGQQ-EDLDAIKNKALKSGASKAYVVDVKNEFAIQYLWPLVKSGALYEDQYILGT-ISRPLIAQKLVEIALTEEVNAVAHGATGKGNDQVRFEYSIKALAPQLEIIAPWRTWDIKSRQEAIVYAKAHGIEVPVTPKAPYSRDHNIWYISHEGGVLEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_HYPNA (Argininosuccinate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=argG PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.767e-52
Identity = 96/186 (51.61%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  +GCEVV FTAD+GQG +EL+   +KA A+G     + ++D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+IAK  +++A  VGADAV HG TGKGNDQVRFEL ++ LNP++ V+APWR+W  + R D +++A++H + +   K+  + +S D NL H S EG +LE+P
Sbjct:   19 LDTSIILKWLQVEFGCEVVTFTADLGQG-EELEPARKKALAAGVKPENIFIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLIAKRQIEIADMVGADAVCHGATGKGNDQVRFELGYYGLNPDIKVIAPWRDWAFKSRTDLLKFAEEHGIEIAKDKRGEAPFSVDANLLHSSSEGKVLENP 203          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SULNB (Argininosuccinate synthase OS=Sulfurovum sp. (strain NBC37-1) GN=argG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.145e-51
Identity = 97/185 (52.43%), Postives = 136/185 (73.51%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVP-VTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL++ Y CEVV FTAD+GQG +E++   +KA   G     + + DL+EEFV+D++FP  RA AIYE +YLLGTS+ARP+I+K  +++A + GADAV+HG TGKGNDQVRFEL + AL+P++ V+APWREWD+  R   + YA++H + +    K   YS D NL H+S+EG+ LE+P
Sbjct:   17 LDTSIILKWLQDEYECEVVTFTADLGQG-EEVEPARQKALDMGIKPENIFILDLREEFVRDFVFPMFRANAIYEGEYLLGTSIARPLISKKQIEIAHQTGADAVSHGATGKGNDQVRFELGYLALDPDIAVIAPWREWDLNSRTKLLAYAQEHGINIDNKGKPKPYSMDANLLHISYEGEHLENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PARDP (Argininosuccinate synthase OS=Paracoccus denitrificans (strain Pd 1222) GN=argG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.145e-51
Identity = 98/186 (52.69%), Postives = 138/186 (74.19%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+  YGCEV+ FTAD+GQG +EL+   +KA+  G     + + D++EEFV+D++FP  RA A+YE  YLLGTS+ARP+I+K +V++A + GADAVAHG TGKGNDQVRFEL+ +AL+P + V+APWREWD+  R   IE+A+++ +P+   K+  + +S D NL H S EG  LE+P
Sbjct:   16 LDTSIILKWLQTEYGCEVITFTADLGQG-EELEPARQKAELLGIKPENIHIVDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKHLVEIAHQHGADAVAHGATGKGNDQVRFELSAYALDPSIKVIAPWREWDLTSRTKLIEFAEQNQIPIAKDKRGEAPFSVDANLLHTSSEGKALENP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROA2 (Argininosuccinate synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=argG PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.495e-51
Identity = 99/182 (54.40%), Postives = 131/182 (71.98%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV++ WL++ Y  E+V  T ++GQ  KE++ LEEKA A+GA      DL++EFV+  I+P L+AGA+YE  Y L T++ RP+IAKA+VD+A E     +AHGCTGKGNDQVRFE+TF +L P+L V+AP REW+   RE  I YA +HN+PV  TKKS YS D N+W +S E  +LEDP
Sbjct:   14 LDTSVMIKWLKDKYDAEIVAVTGNLGQE-KEVENLEEKAIATGASSFAFLDLRKEFVESCIWPALKAGALYEDVYPLATALGRPLIAKALVDIALENNCTMLAHGCTGKGNDQVRFEVTFASLAPQLAVLAPLREWEFTSREAEIAYAMEHNIPVSATKKSPYSIDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEGPC (Argininosuccinate synthase OS=Legionella pneumophila (strain Corby) GN=argG PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.495e-51
Identity = 95/183 (51.91%), Postives = 137/183 (74.86%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++PWL+E+Y   EV+    D+GQ  ++LD ++ KA  SGA +  V D+K EF   Y++P +++GA+YE +Y+LGT ++RP+IA+ +V++A     +AVAHG TGKGNDQVRFE +  AL P+L ++APWR WDI+ R++AI YAK H + VPVT K+ YSRD N+W++SHEG +LEDP
Sbjct:   16 LDTSIMIPWLKEHYEHAEVIAVICDLGQQ-EDLDTIKNKALKSGASKAYVVDVKNEFAIQYLWPLVKSGALYEDQYILGT-ISRPLIAQKLVEIALTEQVNAVAHGATGKGNDQVRFEYSIKALAPQLEIIAPWRTWDIKSRQEAIVYAKAHGIEVPVTPKAPYSRDHNIWYISHEGGVLEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DICT6 (Argininosuccinate synthase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=argG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.332e-51
Identity = 100/182 (54.95%), Postives = 132/182 (72.53%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL + Y  +V+  T D+GQGI  LD ++ KA+  G  +  V DLKEEFVKDYI P +++ A+YER Y L T+++RP+IAK +V +A+E GA  VAHGCTGKGNDQVR +L   AL P+L ++AP REW+   RE+ IEYA ++N+P+PV++KS YS D NLW  S EG ILEDP
Sbjct:   14 LDTSVAIKWLMQKYSLDVITLTVDIGQGIN-LDEIKNKAENLGVEKAYVLDLKEEFVKDYIIPAIKSNAMYERVYPLATALSRPLIAKYLVKIAKENGAKYVAHGCTGKGNDQVRIDLGVKALAPDLEIIAPVREWNF-SREEEIEYALENNIPIPVSRKSPYSIDENLWGRSIEGGILEDP 193          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PELLD (Argininosuccinate synthase OS=Pelodictyon luteolum (strain DSM 273) GN=argG PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.422e-51
Identity = 97/182 (53.30%), Postives = 130/182 (71.43%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++ WL++ Y  ++V  T ++GQ  KE++ LE KA A+GA      DLK+ FV+DYI+  L+AGA+YE  Y L T++ RP++AKA+VDVA E     +AHGCTGKGNDQVRFE+TF +L P L V+AP REW+   RE  ++YA KHN+PV  TKKS YS D N+W +S E  +LEDP
Sbjct:   14 LDTSIMIKWLKDKYDADIVAVTGNLGQQ-KEIENLESKAIATGASGFHFVDLKKPFVEDYIWRALKAGALYEDVYPLATALGRPLLAKALVDVALEENCTMLAHGCTGKGNDQVRFEVTFASLAPHLKVLAPLREWEFTSRESEMDYAIKHNIPVSATKKSPYSIDENIWGISIECGVLEDP 194          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_LAWIP6.713e-5254.40Argininosuccinate synthase OS=Lawsonia intracellul... [more]
ASSY_LEGPL8.767e-5251.91Argininosuccinate synthase OS=Legionella pneumophi... [more]
ASSY_LEGPA8.767e-5251.91Argininosuccinate synthase OS=Legionella pneumophi... [more]
ASSY_HYPNA8.767e-5251.61Argininosuccinate synthase OS=Hyphomonas neptunium... [more]
ASSY_SULNB1.145e-5152.43Argininosuccinate synthase OS=Sulfurovum sp. (stra... [more]
ASSY_PARDP1.145e-5152.69Argininosuccinate synthase OS=Paracoccus denitrifi... [more]
ASSY_PROA21.495e-5154.40Argininosuccinate synthase OS=Prosthecochloris aes... [more]
ASSY_LEGPC1.495e-5151.91Argininosuccinate synthase OS=Legionella pneumophi... [more]
ASSY_DICT63.332e-5154.95Argininosuccinate synthase OS=Dictyoglomus thermop... [more]
ASSY_PELLD7.422e-5153.30Argininosuccinate synthase OS=Pelodictyon luteolum... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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