CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHLPB (Argininosuccinate synthase OS=Chlorobium phaeobacteroides (strain BS1) GN=argG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.159e-50
Identity = 94/182 (51.65%), Postives = 130/182 (71.43%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV++ WL++ Y  +++  T ++GQ  KE++ LE+KA  +GA      DL++EFV++YI+P L+AGA+YE  Y L T++ RP++AKA+VDVA       +AHGCTGKGNDQVRFE+TF +L P L V+AP REW+   RE  + YA+KH +PV  TKKS YS D N+W +S E  +LEDP
Sbjct:   14 LDTSVMIKWLKDKYDADIIAVTGNLGQE-KEIENLEQKAFDTGASGFSFLDLRKEFVENYIWPALKAGALYEEVYPLATALGRPLLAKALVDVALSEDCTMIAHGCTGKGNDQVRFEVTFASLAPHLKVLAPLREWEFNSREAEMAYAEKHGIPVSATKKSPYSIDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHLPD (Argininosuccinate synthase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=argG PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.820e-50
Identity = 96/182 (52.75%), Postives = 129/182 (70.88%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++ WL++ Y  E+V  T ++GQ  KE++ LE KA A+GA      DL++EFV++YI+  L+AGA+YE  Y L T++ RP++AKA+VD A   G   +AHGCTGKGNDQVRFE+TF +L P L V+AP REW+   RE  I YA +HN+PV  TKKS YS D N+W +S E  +LEDP
Sbjct:   14 LDTSIMIKWLKDKYDAEIVAVTGNLGQQ-KEIENLESKAIATGASAFQFVDLRKEFVEEYIWKALKAGALYEDVYPLATALGRPLLAKAIVDAALAEGCTMLAHGCTGKGNDQVRFEVTFASLAPHLKVLAPLREWEFTSREAEIAYALEHNIPVSATKKSPYSIDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DICTD (Argininosuccinate synthase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=argG PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.811e-50
Identity = 97/182 (53.30%), Postives = 133/182 (73.08%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL + Y  +V+  T D+GQGI +L+ ++ KA+  G  +  V DL+EEF+KDYI P +++ A+YER Y L T+++RP+IAK +V VA+E GA  VAHGCTGKGNDQVR +L   AL P+L ++AP REW+   RE+ IEYA ++N+P+PV++K+ YS D NLW  S EG ILEDP
Sbjct:   14 LDTSVAIKWLMQKYSLDVITLTVDIGQGI-DLNEIKNKAENLGVEKAYVLDLREEFIKDYIIPAIKSNAMYERVYPLATALSRPLIAKYLVKVAKENGAKYVAHGCTGKGNDQVRIDLGVKALAPDLEIIAPVREWNF-SREEEIEYAIENNIPIPVSRKNPYSIDENLWGRSIEGGILEDP 193          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AQUAE (Argininosuccinate synthase OS=Aquifex aeolicus GN=argG PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.811e-50
Identity = 100/182 (54.95%), Postives = 134/182 (73.63%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+IV WL E  G EV+ +TADVGQG +EL  + EKA+ +GA + +V+DLKE F ++Y  P LRA A+YE KY L  +++RP+IA+ +V  A +  AD VAHG TGKGNDQVRFEL+ +ALNP++ V+AP REW+ + RE+ +EYA++ N+PV  TK+  YS DRNLW +S E   LEDP
Sbjct:   14 LDTSIIVRWLTEK-GYEVITYTADVGQG-EELSEIPEKARRAGAIEAIVEDLKETFAENYCLPTLRALALYEGKYPLTAALSRPLIAERLVYYAEKFNADYVAHGSTGKGNDQVRFELSVWALNPDIEVLAPVREWEFKSREEQVEYAQRFNIPVKATKEKPYSIDRNLWGVSIECGPLEDP 193          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHLL2 (Argininosuccinate synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=argG PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.072e-49
Identity = 95/182 (52.20%), Postives = 129/182 (70.88%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV++ WL++ Y  E+V  T ++GQ  KE++ LE KA ++GA      DL++ FV++YI+  L+AGA+YE  Y L T++ RP++AKA+VDVA E     +AHGCTGKGNDQVRFE+TF +L P L ++AP REW+   RE  I YA +HN+PV  TKKS YS D N+W +S E  +LEDP
Sbjct:   14 LDTSVMIKWLKDKYDAEIVAVTGNLGQQ-KEIENLESKAYSTGASAFRFVDLRKTFVEEYIWRALKAGALYEDVYPLATALGRPLLAKALVDVALEENCTMLAHGCTGKGNDQVRFEVTFASLAPHLKILAPLREWEFTSREAEIAYALEHNIPVSATKKSPYSIDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_XENTR (Argininosuccinate synthase OS=Xenopus tropicalis GN=ass1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.400e-49
Identity = 93/186 (50.00%), Postives = 139/186 (74.73%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+ WL+E  G +V+ + A++GQ  ++ +   +KA   GA ++ ++D++++FV++YI+P ++A AIYE +YLLGTS+ARP IAK  V++A++  A+ V+HG TGKGNDQ+RFELT +AL PE+ ++APWR  +     +GR D +EYAKKHN+PVPVT K  +S D N+ H+S+EG ILE+P
Sbjct:   16 LDTSCILVWLKEQ-GYDVIAYLANIGQN-EDFEAARKKAVNLGAKKVYIEDMRQQFVEEYIWPAVQANAIYEDRYLLGTSLARPCIAKKQVEIAKKEAAEYVSHGATGKGNDQIRFELTCYALYPEVKIIAPWRMPEFYNRFRGRSDLMEYAKKHNIPVPVTPKDPWSMDENIMHISYEGGILENP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYMTH (Argininosuccinate synthase OS=Symbiobacterium thermophilum GN=argG PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.828e-49
Identity = 96/182 (52.75%), Postives = 127/182 (69.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + W++ENY  +VV    DVG   K+L+ + +KA + GA +  V D ++EF  D+I P L+A A YE KY L  +++RP+IAK +V +A E GAD VAHGCTGKGNDQVRFE++  ALNP L V+AP REW    RE+ I+YA+KH +PVPV K++ +S D NLW  S E  +LEDP
Sbjct:   14 LDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKALSIGAVKSYVYDARKEFAYDFILPTLQANACYESKYYLSAALSRPLIAKLLVQIAEEEGADFVAHGCTGKGNDQVRFEVSVAALNPNLQVLAPVREWG-WSREEEIDYAQKHGIPVPVGKENPFSIDVNLWGRSCEAGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PELPB (Argininosuccinate synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=argG PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.388e-49
Identity = 94/182 (51.65%), Postives = 129/182 (70.88%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+++ WL++ Y  E+V  T ++GQ  KE++ LE KA A+GA +    DL++EFV++YI+  L+AGA+YE  Y L T++ RP++AKA+VD A   G   +AHGCTGKGNDQVRFE+TF +L P L V+AP REW+   RE  I YA +HN+ V  TKK+ YS D N+W +S E  +LEDP
Sbjct:   14 LDTSIMIKWLKDKYDAEIVAVTGNLGQQ-KEIENLESKAIATGASKFQFLDLRKEFVEEYIWRALKAGALYEDVYPLATALGRPLLAKAIVDTALAEGCTMLAHGCTGKGNDQVRFEVTFASLAPHLKVLAPLREWEFTSRESEIAYALEHNIQVSATKKNPYSIDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THENN (Argininosuccinate synthase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=argG PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.319e-49
Identity = 98/186 (52.69%), Postives = 132/186 (70.97%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL E  G EV+ + A+VGQ   + + ++EKA  +GA ++ ++DL+ EFV DYIF  L   A+YE +YLLGT++ARP+IAK  V++A + GA  VAHG TGKGNDQVRFELT+ ALNP L V++PW++ +     +GR D I YA++  +PV V+KK  YS D NL H+SHE   LEDP
Sbjct:   13 LDTSVILKWLCEK-GFEVIAYVANVGQK-DDFEAIKEKALKTGASKVYIEDLRREFVTDYIFTALLGNALYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLSRFKGRTDLINYAREKGIPVKVSKKRPYSEDENLMHISHEAGKLEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHLTE (Argininosuccinate synthase OS=Chlorobium tepidum GN=argG PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.319e-49
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV++ WL++ Y G E+V  T ++GQ + E+D LE+KA A+GA      DL++ FV++YI+  L+AGA+YE  Y L T++ RP++AKA+VDVA   G   + HGCTGKGNDQVRFE+ F AL P + VVAP REW+   RE  I YA +HN+PV  TKK+ YS D N+W +S E  +LEDP
Sbjct:   14 LDTSVMIKWLKDKYEGAEIVAVTGNLGQKM-EVDNLEQKAIATGAKSFHFVDLRKTFVEEYIWKALKAGALYEDVYPLATALGRPLLAKALVDVALAEGCTMLTHGCTGKGNDQVRFEVAFAALAPHMKVVAPLREWEFTSREQEIAYAMEHNIPVSATKKNPYSIDENIWGISIECGVLEDP 195          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_CHLPB2.159e-5051.65Argininosuccinate synthase OS=Chlorobium phaeobact... [more]
ASSY_CHLPD2.820e-5052.75Argininosuccinate synthase OS=Chlorobium phaeobact... [more]
ASSY_DICTD4.811e-5053.30Argininosuccinate synthase OS=Dictyoglomus turgidu... [more]
ASSY_AQUAE4.811e-5054.95Argininosuccinate synthase OS=Aquifex aeolicus GN=... [more]
ASSY_CHLL21.072e-4952.20Argininosuccinate synthase OS=Chlorobium limicola ... [more]
ASSY_XENTR1.400e-4950.00Argininosuccinate synthase OS=Xenopus tropicalis G... [more]
ASSY_SYMTH1.828e-4952.75Argininosuccinate synthase OS=Symbiobacterium ther... [more]
ASSY_PELPB2.388e-4951.65Argininosuccinate synthase OS=Pelodictyon phaeocla... [more]
ASSY_THENN5.319e-4952.69Argininosuccinate synthase OS=Thermotoga neapolita... [more]
ASSY_CHLTE5.319e-4952.46Argininosuccinate synthase OS=Chlorobium tepidum G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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