CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ANASP (Argininosuccinate synthase OS=Anabaena sp. (strain PCC 7120) GN=argG PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.548e-48
Identity = 97/183 (53.01%), Postives = 131/183 (71.58%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ +G E V+   AD+GQG  EL+ + EKA  SGA + +V D+KE F+KDY FP ++A A+YE +Y LGT++ARP+IAK +V+ A + GADA+AHGCTGKGNDQVRF+++  ALNP L ++AP REW +  RE  I Y +K  +P PV K S YS D+NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKQEWGVEEVITLAADLGQG-DELEPIREKALKSGASESLVADVKESFIKDYAFPAIQANALYENRYPLGTALARPLIAKILVEAAAKYGADAIAHGCTGKGNDQVRFDVSCTALNPNLKILAPAREWGM-SREATIAYGEKFGIPSPVKKSSPYSIDKNLLGRSIEAGALEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_NOSP7 (Argininosuccinate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=argG PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.640e-48
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ +G E V+   AD+GQG  EL+ + EKA  SGA + +V D+K+ FVKDY F  ++A A+YE +Y LGT++ARP+IAK +V+ A + GADA+AHGCTGKGNDQVRF+++  ALNP L ++AP REW +  RE+ I Y +K  +P PV K S YS D+NL   S E  +LEDP
Sbjct:   15 VDTSVCIPYLKQEWGVEEVITLAADLGQG-DELEPIREKALKSGASESLVADVKDSFVKDYAFGAIQANALYENRYPLGTALARPLIAKILVETAEKYGADAIAHGCTGKGNDQVRFDVSVTALNPNLKILAPAREWGM-SREETIAYGEKFGIPSPVKKSSPYSIDKNLLGRSIEAGLLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHLCH (Argininosuccinate synthase OS=Chlorobium chlorochromatii (strain CaD3) GN=argG PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.448e-48
Identity = 92/182 (50.55%), Postives = 127/182 (69.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV++ WL++ Y  ++V  T ++GQ  KE++ LE KA A+GA      DL+ EFV++YI+  L+AGA+YE  Y L T++ RP++AKA+VDVA       +AHGCTGKGNDQVRFE+TF +L P + ++AP R W+   RE  I YA +HN+PV  TKK+ YS D N+W +S E  +LEDP
Sbjct:   14 LDTSVMIKWLKDKYDADIVAVTGNLGQQ-KEIENLESKALATGASSFHFVDLRTEFVEEYIWRALKAGALYEDVYPLATALGRPLLAKALVDVAVAENCTMLAHGCTGKGNDQVRFEVTFASLAPHMKILAPLRVWEFTSREAEIAYAMEHNIPVSATKKNPYSVDENIWGISIECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THEMA (Argininosuccinate synthase OS=Thermotoga maritima GN=argG PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.310e-47
Identity = 97/186 (52.15%), Postives = 130/186 (69.89%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL E  G +V+ + A+VGQ   +   ++EKA  +GA ++ V+DL+ EFV DYIF  L   A+YE +YLLGT++ARP+IAK  V++A + GA  VAHG TGKGNDQVRFELT+ ALNP L V++PW++ +     +GR D I YA +  +P+ V+KK  YS D NL H+SHE   LEDP
Sbjct:   13 LDTSVILKWLCEK-GFDVIAYVANVGQK-DDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAMYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLAKFKGRTDLINYAMEKGIPIKVSKKRPYSEDENLMHISHEAGKLEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROM3 (Argininosuccinate synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=argG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.235e-47
Identity = 100/183 (54.64%), Postives = 131/183 (71.58%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGC-EVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  +G  EV+ F AD+GQG  ELD +  KA  +GA Q +V DL E FV+++  P +RA A+YE +Y L T++ARP+IA+ +V+VAREVGADAVAHGCTGKGNDQVRF+L   AL P+L V+ P REW +  RE+AI Y ++  +P PV+KKS YS D NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKHEWGVDEVITFAADLGQG-DELDPIRLKALDAGASQSLVGDLIEPFVEEFALPAIRANALYEGRYPLSTALARPLIARRLVEVAREVGADAVAHGCTGKGNDQVRFDLAIAALAPDLKVLTPAREWSM-SREEAIAYGERCGIPAPVSKKSPYSIDLNLLGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNS9 (Argininosuccinate synthase OS=Synechococcus sp. (strain CC9902) GN=argG PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.919e-47
Identity = 97/183 (53.01%), Postives = 133/183 (72.68%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ +G E V+ F AD+GQG  EL+ + +KA  +GA Q +V DL + F++D+ FP +RA A+YE +Y L T++ARP+IAK +V+VAREVGADAVAHGCTGKGNDQVRF++   +L P+L V+ P REW +  RE+ I Y ++  +P PV+KKS YS D NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKQEWGVEEVITFAADLGQG-DELEPIRQKALDAGASQSLVGDLIQPFIEDFAFPAIRANALYEGRYPLSTALARPLIAKRLVEVAREVGADAVAHGCTGKGNDQVRFDVAIASLAPDLKVLTPAREWGM-SREETIAYGERFGMPSPVSKKSPYSIDLNLLGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROM2 (Argininosuccinate synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=argG PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.919e-47
Identity = 98/183 (53.55%), Postives = 132/183 (72.13%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGC-EVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ YG  EV+ F AD+GQG ++L+ + +KA  SGA Q +V +L   FV+ Y FP +RA A+Y  KY L T++ARP+IA+ +V++ARE  ADAVAHGCTGKGNDQVRF+L   AL P+L ++ P REW++  RE+AI Y +K  +P PV+KKS YS D NL   S E  ILEDP
Sbjct:   15 VDTSVCIPYLKKEYGISEVITFVADLGQG-EDLELIRQKALNSGASQSIVGNLVNSFVERYAFPAIRANALYLDKYPLSTALARPLIAENLVNIAREFSADAVAHGCTGKGNDQVRFDLAINALGPDLKIITPAREWNM-SREEAIIYGEKFGIPAPVSKKSPYSIDVNLLGRSIEAGILEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_GLOVI (Argininosuccinate synthase OS=Gloeobacter violaceus GN=argG PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.919e-47
Identity = 97/183 (53.01%), Postives = 134/183 (73.22%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  +G E VV   AD+GQG ++L+ + +KA ASGA Q +V+D +E+FV DY F  L+A A+YE +Y L T++ARP+IA+ +V  A+ VGADAVAHGCTGKGNDQVRF+++  AL+P+L V+AP REW +  RE+ I Y +++ +P PV KKS YS D NL   S E  +LEDP
Sbjct:   14 VDTSVCIPYLKHEWGVEQVVALAADLGQG-EDLEAVRQKALASGADQAIVQDAREDFVYDYAFAALQANALYEGRYPLATALARPLIARILVKCAQAVGADAVAHGCTGKGNDQVRFDVSIGALDPKLKVLAPAREWGM-SREETIAYGERYGIPAPVKKKSPYSIDFNLLGRSVECGVLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROMS (Argininosuccinate synthase OS=Prochlorococcus marinus (strain AS9601) GN=argG PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.812e-47
Identity = 98/183 (53.55%), Postives = 132/183 (72.13%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGC-EVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  YG  EVV F AD+GQG ++L+ + +KA  SGA + +V +L   FV+ Y FP +RA A+Y  KY L T++ARP+IA+ +V++ARE+ ADAVAHGCTGKGNDQVRF+L   AL P+L ++ P REW++  RE+AI Y +K  +P PV+KKS YS D NL   S E  ILEDP
Sbjct:   15 VDTSVCIPYLKNEYGISEVVTFVADLGQG-EDLELVRQKALNSGASKSIVGNLVNSFVERYAFPAIRANALYLDKYPLSTALARPLIAENLVNIAREINADAVAHGCTGKGNDQVRFDLAINALGPDLKIITPAREWNM-SREEAILYGEKFGIPAPVSKKSPYSIDVNLLGRSIEAGILEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNPX (Argininosuccinate synthase OS=Synechococcus sp. (strain WH8102) GN=argG PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.978e-47
Identity = 96/183 (52.46%), Postives = 133/183 (72.68%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ +G E V+ F AD+GQG  EL+ + +KA  +GA Q +V DL + F++++ FP +RA A+YE +Y L T++ARP+IA+ +V+VAREVGADAVAHGCTGKGNDQVRF++   AL P+L V+ P REW +  RE+ I Y ++  +P PV+KKS YS D NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKQEWGVEEVITFAADLGQG-DELEPIRQKALDAGASQSLVGDLIQPFIEEFAFPAIRANALYEGRYPLSTALARPLIARRLVEVAREVGADAVAHGCTGKGNDQVRFDVAIAALAPDLKVLTPAREWGM-SREETIAYGERCGIPAPVSKKSPYSIDLNLLGRSIEAGPLEDP 195          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_ANASP1.548e-4853.01Argininosuccinate synthase OS=Anabaena sp. (strain... [more]
ASSY_NOSP72.640e-4852.46Argininosuccinate synthase OS=Nostoc punctiforme (... [more]
ASSY_CHLCH3.448e-4850.55Argininosuccinate synthase OS=Chlorobium chlorochr... [more]
ASSY_THEMA1.310e-4752.15Argininosuccinate synthase OS=Thermotoga maritima ... [more]
ASSY_PROM32.235e-4754.64Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_SYNS92.919e-4753.01Argininosuccinate synthase OS=Synechococcus sp. (s... [more]
ASSY_PROM22.919e-4753.55Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_GLOVI2.919e-4753.01Argininosuccinate synthase OS=Gloeobacter violaceu... [more]
ASSY_PROMS3.812e-4753.55Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_SYNPX4.978e-4752.46Argininosuccinate synthase OS=Synechococcus sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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