CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROM9 (Argininosuccinate synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=argG PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.978e-47
Identity = 97/183 (53.01%), Postives = 132/183 (72.13%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGC-EVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  YG  EVV F AD+GQG ++L+ + +KA  SGA + ++ +L   FV+ Y FP +RA A+Y  KY L T++ARP+IA+ +V++ARE+ ADAVAHGCTGKGNDQVRF+L   AL P+L ++ P REW++  RE+AI Y +K  +P PV+KKS YS D NL   S E  ILEDP
Sbjct:   15 VDTSVCIPYLKNEYGISEVVTFVADLGQG-EDLELIRKKALNSGASKSIIGNLVSSFVERYAFPAIRANALYLDKYPLSTALARPLIAENLVNIAREINADAVAHGCTGKGNDQVRFDLAINALGPDLKIITPAREWNM-SREEAILYGEKFGIPAPVSKKSPYSIDVNLLGRSIEAGILEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ANOGA (Argininosuccinate synthase OS=Anopheles gambiae GN=AGAP003015 PE=3 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 4.978e-47
Identity = 94/186 (50.54%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWRE----WDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+ WL E    EV+CF ADVGQ  ++     EKA   GA  +VVKD+K+ FV+ +++P ++ G IYE +YLLGTS+ARP I+K ++DVA + G   ++HG TGKGNDQ+RFEL+ +AL+P + V+APWR        QGR D +EYAK+ N+PV  T K+ +S D N+ H+S+E  ILEDP
Sbjct:   14 LDTSCILKWLLEQ-DYEVICFMADVGQ-TEDFAAAREKALKIGAADVVVKDMKDFFVEKFVWPAVQMGLIYEDRYLLGTSLARPCISKGLMDVAVQRGCSYISHGATGKGNDQIRFELSCYALSPTIRVIAPWRMETFCQRFQGRSDLLEYAKRSNIPVSATTKAPWSMDANIMHISYESGILEDP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROMP (Argininosuccinate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=argG PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.502e-47
Identity = 97/183 (53.01%), Postives = 131/183 (71.58%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGC-EVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  YG  EVV F AD+GQG  +L+ + +KA  SGA + V+ +L + FV+ Y FP +RA A+Y  KY L T++ARP+IA+ +V++ARE+ ADAVAHGCTGKGNDQVRF+L   AL P+L ++ P REW +  RE+AI Y +K  +P PV+KKS YS D NL   S E  +LEDP
Sbjct:   15 VDTSVCIPYLKNEYGISEVVTFVADLGQG-DDLEIVRQKALNSGATKSVIGNLVDNFVEKYAFPAIRANALYGEKYPLSTALARPLIAENLVNLARELNADAVAHGCTGKGNDQVRFDLAIHALGPDLQIITPAREWKM-SREEAILYGEKFGIPAPVSKKSPYSIDVNLLGRSIEAGLLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNPW (Argininosuccinate synthase OS=Synechococcus sp. (strain WH7803) GN=argG PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.109e-46
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ +G E V+ F AD+GQG  EL+ +  KA  +GA Q +V DL + F++++ FP +RA A+YE +Y L T++ARP+IA+ +V+VAREVGADAVAHGCTGKGNDQVRF++   AL P+L V+ P REW +  RE+ I Y ++  +P PV+KKS YS D NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKQEWGVEEVITFAADLGQG-DELEPIRRKALEAGASQSLVGDLIQPFIEEFAFPAIRANALYEGRYPLSTALARPLIARRLVEVAREVGADAVAHGCTGKGNDQVRFDVAIAALAPDLKVLTPAREWGM-SREETIAYGERCGLPAPVSKKSPYSIDLNLLGRSVEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BOVIN (Argininosuccinate synthase OS=Bos taurus GN=ASS1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.448e-46
Identity = 89/186 (47.85%), Postives = 136/186 (73.12%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+ WL+E  G +V+ + A++GQ  ++ +   +KA   GA ++ ++D+ +EFV+++I+P +++ A+YE +YLLGTS+ARP IA+  V++A+  GA  V+HG TGKGNDQ+RFELT ++L P++ V+APWR  +     QGR D +EYAK+H +PVPVT K+ +S D NL H+S+E  ILE+P
Sbjct:   15 LDTSCILVWLKEQ-GYDVIAYLANIGQK-EDFEEARKKALKLGAKKVFIEDISKEFVEEFIWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQIRFELTCYSLAPQIKVIAPWRMPEFYNRFQGRNDLMEYAKQHGIPVPVTPKNPWSMDENLMHISYEAGILENP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNR3 (Argininosuccinate synthase OS=Synechococcus sp. (strain RCC307) GN=argG PE=3 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 1.892e-46
Identity = 95/183 (51.91%), Postives = 132/183 (72.13%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  +G E V+ F AD+GQG  EL+ + +KA  +GA Q +V DL E F+ ++ FP +RA A+YE +Y L T++ARP+IA+ +V++AREVGADAVAHGCTGKGNDQVRF++   AL P+L V+ P REW +  RE+ I Y +++ +P PV+K+S YS D NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKHEWGVEEVITFAADLGQG-DELEPIRQKALDAGASQSLVGDLIEPFITEFAFPAIRANALYEGRYPLSTALARPLIARRLVEIAREVGADAVAHGCTGKGNDQVRFDVAIGALAPDLKVLTPAREWGM-SREETIAYGERYGLPSPVSKRSPYSIDLNLLGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_GEOTN (Argininosuccinate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=argG PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.892e-46
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL+E  G +V+    D+G+G K+LD ++EKA   GA +  V D+K+EF  +Y    L+A A+YE KY L ++++RP+IAK +V++A   GA AVAHGCTGKGNDQVRFE++  ALNP+L+V+AP REW    RE+ IEYAKKH +P+PV   S +S D+NLW  S+E  ILEDP
Sbjct:   14 LDTSVAIKWLQER-GYDVIACCLDLGEG-KDLDFVKEKALKVGAIKSYVIDVKDEFANEYALIALQANALYEGKYPLVSALSRPLIAKKLVEIAELEGAVAVAHGCTGKGNDQVRFEVSIKALNPDLDVIAPVREWS-WSREEEIEYAKKHGIPIPVDLDSPFSIDQNLWGRSNECGILEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_GEOKA (Argininosuccinate synthase OS=Geobacillus kaustophilus GN=argG PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.892e-46
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL+E  G +V+    D+G+G K+LD ++EKA   GA +  V D+K+EF  +Y    L+A A+YE KY L ++++RP+IAK +V++A   GA AVAHGCTGKGNDQVRFE++  ALNP+L+V+AP REW    RE+ IEYAKKH +P+PV   S +S D+NLW  S+E  ILEDP
Sbjct:   14 LDTSVAIKWLQER-GYDVIACCLDLGEG-KDLDFVKEKALKVGAMKSYVIDVKDEFANEYALIALQANALYEGKYPLVSALSRPLIAKKLVEIAELEGAVAVAHGCTGKGNDQVRFEVSIKALNPDLDVIAPVREWS-WSREEEIEYAKKHGIPIPVDLDSPFSIDQNLWGRSNECGILEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNJB (Argininosuccinate synthase OS=Synechococcus sp. GN=argG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.471e-46
Identity = 94/182 (51.65%), Postives = 130/182 (71.43%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            +DTSV +P+L+  +G E VV    D+GQG  EL+ ++ KA  +GA Q +V++  +  + DY FP ++A A+YE++Y L T++ARP+IAK +V+VA EVGADAVAHGCTGKGNDQVRF+L   ALNP+L V+AP REW +  RE+ I Y +++ +P+PV K S YS D N+   S E  ILED
Sbjct:   15 VDTSVCIPYLKHEWGVESVVALAVDLGQGA-ELEAIQAKALRAGAEQSLVREAVQALITDYAFPAIQANALYEQRYPLSTALARPLIAKLLVEVAEEVGADAVAHGCTGKGNDQVRFDLAIAALNPQLKVLAPAREWGMT-REETIAYGERYGIPMPVQKSSPYSIDLNILGRSAEAGILED 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROMM (Argininosuccinate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=argG PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.471e-46
Identity = 99/182 (54.40%), Postives = 129/182 (70.88%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            +DTSV +P+L+  +G E V+ F AD+GQG  ELD +  KA  +GA Q +V DL E FV+ +  P +RA A+YE +Y L T++ARP+IA+ +V+VAREVGADAVAHGCTGKGNDQVRF+L   AL P+L V+ P REW +  RE+AI Y ++  +P PV+KKS YS D NL   S E   LED
Sbjct:   15 VDTSVCIPYLKHEWGVEEVITFAADLGQG-DELDPIRLKALDAGASQSLVGDLIEPFVEQFALPAIRANALYEGRYPLSTALARPLIARQLVEVAREVGADAVAHGCTGKGNDQVRFDLAIAALAPDLKVLTPAREWSM-SREEAIAYGERCGIPAPVSKKSPYSIDLNLLGRSIEAGPLED 194          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_PROM94.978e-4753.01Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_ANOGA4.978e-4750.54Argininosuccinate synthase OS=Anopheles gambiae GN... [more]
ASSY_PROMP6.502e-4753.01Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_SYNPW1.109e-4652.46Argininosuccinate synthase OS=Synechococcus sp. (s... [more]
ASSY_BOVIN1.448e-4647.85Argininosuccinate synthase OS=Bos taurus GN=ASS1 P... [more]
ASSY_SYNR31.892e-4651.91Argininosuccinate synthase OS=Synechococcus sp. (s... [more]
ASSY_GEOTN1.892e-4653.30Argininosuccinate synthase OS=Geobacillus thermode... [more]
ASSY_GEOKA1.892e-4653.30Argininosuccinate synthase OS=Geobacillus kaustoph... [more]
ASSY_SYNJB2.471e-4651.65Argininosuccinate synthase OS=Synechococcus sp. GN... [more]
ASSY_PROMM2.471e-4654.40Argininosuccinate synthase OS=Prochlorococcus mari... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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