CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11611 contig Csv1_Contig11611:422..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PHOPR (Argininosuccinate synthase OS=Photobacterium profundum GN=argG PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 5.294e-65
Identity = 115/181 (63.54%), Postives = 139/181 (76.80%), Query Frame = -1 
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS I+PWL+ENY CEVV F ADVGQG  EL+G+EEKA ASGA    + DLKEE V DYI+P L+ GAIYE KYLLGTSMARP+IAKA V+ A  VGADAV HGCTGKGNDQVRFE  + AL P+L V+APWREWD++ RE  ++Y  + ++P   + + IYSRD N WH+S EG +LE+
Sbjct:   15 LDTSAIIPWLKENYDCEVVAFVADVGQGAAELEGIEEKAIASGASSCYIADLKEEMVADYIYPSLKTGAIYEGKYLLGTSMARPIIAKAQVECALAVGADAVCHGCTGKGNDQVRFEGAYAALAPQLTVIAPWREWDLRSREALLDYLAERDIPCTASLEKIYSRDANAWHISTEGGVLEN 195
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEPBP (Argininosuccinate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=argG PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 5.294e-65
Identity = 118/182 (64.84%), Postives = 143/182 (78.57%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ YGCEV+ F ADVGQ  +EL GLEEK K +GA ++ ++DL+ EF +D+I+P +R  AIYE +YLLGTS+ARP+IAKAM DVA++ GADA +HG TGKGNDQVRFELTF AL+P L ++APWR WD  GR D IEYAKK  +PVPVT    YS DRNL HLS EG ILEDP
Sbjct:   18 LDTSVILAWLKDTYGCEVIAFCADVGQK-EELTGLEEKGKNTGASKVYIQDLRLEFARDFIYPAIRGNAIYEMRYLLGTSLARPLIAKAMADVAKKEGADAFSHGATGKGNDQVRFELTFKALSPNLQIIAPWRTWDFGGRADLIEYAKKKGIPVPVTAAKPYSMDRNLMHLSFEGGILEDP 198
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEPBA (Argininosuccinate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=argG PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 5.294e-65
Identity = 118/182 (64.84%), Postives = 143/182 (78.57%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ YGCEV+ F ADVGQ  +EL GLEEK K +GA ++ ++DL+ EF +D+I+P +R  AIYE +YLLGTS+ARP+IAKAM DVA++ GADA +HG TGKGNDQVRFELTF AL+P L ++APWR WD  GR D IEYAKK  +PVPVT    YS DRNL HLS EG ILEDP
Sbjct:   18 LDTSVILAWLKDTYGCEVIAFCADVGQK-EELTGLEEKGKNTGASKVYIQDLRLEFARDFIYPAIRGNAIYEMRYLLGTSLARPLIAKAMADVAKKEGADAFSHGATGKGNDQVRFELTFKALSPNLQIIAPWRTWDFGGRADLIEYAKKKGIPVPVTAAKPYSMDRNLMHLSFEGGILEDP 198
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHESW (Argininosuccinate synthase OS=Shewanella sp. (strain W3-18-1) GN=argG PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.031e-65
Identity = 118/183 (64.48%), Postives = 141/183 (77.05%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY  CE++ F ADVGQG +EL GL EKA ASGA +  + DLKEEFVKDYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADA+ HGCTGKGNDQVRFE  F AL P+L V+APWREW +Q RED ++Y  + N+    +   IYSRD N +H+SHEG  LEDP
Sbjct:   21 LDTSAIIPWLKENYDNCEIIAFCADVGQGEEELVGLTEKALASGASECHIVDLKEEFVKDYIYPTMATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWTMQSREDLLDYLAERNIKTSASATKIYSRDANAFHISHEGGELEDP 203
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHEPW (Argininosuccinate synthase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=argG PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.031e-65
Identity = 117/183 (63.93%), Postives = 139/183 (75.96%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+E Y  CE+V F ADVGQG +EL+GL EKA ASGA +  + DLKEE V DYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADAV HGCTGKGNDQVRFE  F AL P+L V+APWREW++  RED ++Y  + N+    +   IYSRD N WH+SHEG  LEDP
Sbjct:   21 LDTSAIIPWLKETYDNCEIVAFCADVGQGSEELEGLHEKAIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADAVCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWEMVSREDLLDYLAERNIETTASATKIYSRDANAWHISHEGGELEDP 203
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHEPC (Argininosuccinate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=argG PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.031e-65
Identity = 118/183 (64.48%), Postives = 141/183 (77.05%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY  CE++ F ADVGQG +EL GL EKA ASGA +  + DLKEEFVKDYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADA+ HGCTGKGNDQVRFE  F AL P+L V+APWREW +Q RED ++Y  + N+    +   IYSRD N +H+SHEG  LEDP
Sbjct:   21 LDTSAIIPWLKENYDNCEIIAFCADVGQGEEELVGLTEKALASGASECHIVDLKEEFVKDYIYPTMATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWTMQSREDLLDYLAERNIKTSASATKIYSRDANAFHISHEGGELEDP 203
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PSYIN (Argininosuccinate synthase OS=Psychromonas ingrahamii (strain 37) GN=argG PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 9.031e-65
Identity = 114/183 (62.30%), Postives = 142/183 (77.60%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+E Y  CE++ F ADVGQG +EL GLEEKA ASGA +  + DLKEEFVKDYI+P + +GA+YE  YLLGT+MARP+IAKA V+VA +VGADA+ HGCTGKGNDQ+RFE  F AL PEL V+APWREW+++ RED ++Y  + N+    +   IYSRD N WH+SHEG  LE+P
Sbjct:   15 LDTSAIIPWLKETYDDCEIIAFCADVGQGAEELVGLEEKALASGASECHIVDLKEEFVKDYIYPTMASGAVYEGTYLLGTAMARPIIAKAQVEVALKVGADALCHGCTGKGNDQIRFESCFAALAPELQVIAPWREWEMESREDLLDYLAERNIETTASATKIYSRDANAWHISHEGGELENP 197
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHEON (Argininosuccinate synthase OS=Shewanella oneidensis GN=argG PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.012e-64
Identity = 118/183 (64.48%), Postives = 140/183 (76.50%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY  CE++ F ADVGQG +EL GL EKA ASGA +  + DLKEEFVKDYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADA+ HGCTGKGNDQVRFE  F AL P+L V+APWREW +Q RED + Y  + N+    +   IYSRD N +H+SHEG  LEDP
Sbjct:   21 LDTSAIIPWLKENYDNCEIIAFCADVGQGEEELIGLTEKALASGASECHIVDLKEEFVKDYIYPTMATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADALCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWTMQSREDLLAYLAERNIKTSASATKIYSRDANAFHISHEGGELEDP 203
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHEWM (Argininosuccinate synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=argG PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.628e-64
Identity = 117/183 (63.93%), Postives = 138/183 (75.41%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+E Y  CE+V F ADVGQG  EL+GL EKA ASGA +  + DLKEE V DYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADAV HGCTGKGNDQVRFE  F AL P+L V+APWREW++  RED ++Y  + N+    +   IYSRD N WH+SHEG  LEDP
Sbjct:   21 LDTSAIIPWLKETYDDCEIVAFCADVGQGEAELEGLHEKAIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADAVCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWEMVSREDLLDYLAERNIETTASATKIYSRDANAWHISHEGGELEDP 203
[Close]
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SHEPA (Argininosuccinate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=argG PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.432e-64
Identity = 117/183 (63.93%), Postives = 138/183 (75.41%), Query Frame = -1 
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+E Y  CE+V F ADVGQG  EL+GL EKA ASGA +  + DLKEE V DYI+P +  GAIYE  YLLGTSMARP+IAKA V+VAR+VGADAV HGCTGKGNDQVRFE  F AL P+L V+APWREW++  RED ++Y  + N+    +   IYSRD N WH+SHEG  LEDP
Sbjct:   25 LDTSAIIPWLKETYDNCEIVAFCADVGQGDAELEGLYEKAIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADAVCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWEMVSREDLLDYLAERNIATAASATKIYSRDANAWHISHEGGELEDP 207
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_PHOPR5.294e-6563.54Argininosuccinate synthase OS=Photobacterium profu... [more]
ASSY_LEPBP5.294e-6564.84Argininosuccinate synthase OS=Leptospira biflexa s... [more]
ASSY_LEPBA5.294e-6564.84Argininosuccinate synthase OS=Leptospira biflexa s... [more]
ASSY_SHESW9.031e-6564.48Argininosuccinate synthase OS=Shewanella sp. (stra... [more]
ASSY_SHEPW9.031e-6563.93Argininosuccinate synthase OS=Shewanella piezotole... [more]
ASSY_SHEPC9.031e-6564.48Argininosuccinate synthase OS=Shewanella putrefaci... [more]
ASSY_PSYIN9.031e-6562.30Argininosuccinate synthase OS=Psychromonas ingraha... [more]
ASSY_SHEON2.012e-6464.48Argininosuccinate synthase OS=Shewanella oneidensi... [more]
ASSY_SHEWM2.628e-6463.93Argininosuccinate synthase OS=Shewanella woodyi (s... [more]
ASSY_SHEPA3.432e-6463.93Argininosuccinate synthase OS=Shewanella pealeana ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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