CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BACSK (Argininosuccinate synthase OS=Bacillus clausii (strain KSM-K16) GN=argG PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.601e-45
Identity = 91/182 (50.00%), Postives = 130/182 (71.43%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV V WL +  G +V+    DVG+G K+L+ +++KA   GA Q    D K+E+ + ++ P L+A A+YE+KY L ++++RP+I+K +V++A + GA AVAHGCTGKGNDQVRFE++  ALNP L V+AP REW    R++ IEYAK HN+P+P+   + YS D+NLW  S+E  +LEDP
Sbjct:   14 LDTSVAVKWLTDK-GYDVIAVGLDVGEG-KDLEFVKQKALQVGAIQSYTIDAKKEYAESFVLPALQAHALYEQKYPLVSALSRPLISKKLVEIAEQTGATAVAHGCTGKGNDQVRFEVSIQALNPNLKVLAPVREW-AWSRDEEIEYAKAHNIPIPIDLDNPYSVDQNLWGRSNECGVLEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_HUMAN (Argininosuccinate synthase OS=Homo sapiens GN=ASS1 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.092e-45
Identity = 87/186 (46.77%), Postives = 135/186 (72.58%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+ WL+E  G +V+ + A++GQ  ++ +   +KA   GA ++ ++D+  EFV+++I+P +++ A+YE +YLLGTS+ARP IA+  V++A+  GA  V+HG TGKGNDQVRFEL+ ++L P++ V+APWR  +     +GR D +EYAK+H +P+PVT K+ +S D NL H+S+E  ILE+P
Sbjct:   15 LDTSCILVWLKEQ-GYDVIAYLANIGQK-EDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRNDLMEYAKQHGIPIPVTPKNPWSMDENLMHISYEAGILENP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNY3 (Argininosuccinate synthase OS=Synechocystis sp. (strain PCC 6803) GN=argG PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.732e-45
Identity = 96/183 (52.46%), Postives = 127/183 (69.40%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L   +G E V+   AD+GQG  EL  ++EKA   GA + +V D KEEFVK+Y F  ++A A+YE +Y L T++ARP+IAK +V+ A + GADAVAHGCTGKGNDQVRF+++  ALNP L V+AP REW +  RE+ I Y +++ V  PV K S YS DRN+   S E   LEDP
Sbjct:   15 VDTSVCIPYLMHEWGVEEVITLAADLGQG-DELGPIQEKALRCGAVESLVIDGKEEFVKEYAFRSIQANALYENRYPLSTALARPLIAKMLVEAAEKYGADAVAHGCTGKGNDQVRFDISIMALNPNLKVLAPAREWKM-SREETIAYGERYGVESPVKKSSPYSIDRNILGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SCHPO (Argininosuccinate synthase OS=Schizosaccharomyces pombe GN=SPBC428.05c PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.568e-45
Identity = 93/186 (50.00%), Postives = 124/186 (66.67%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWR----EWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+ WL E  G EV+C+ A+VGQ  ++ D   EKA   GA ++ V+DL+EEF+ D + P  +A AIYE  YLLGTS+ARP+IA+  + +A +    AV+HGCTGKGNDQVRFEL ++AL P++ V+APWR         GR+D +EYA    +PV  T K  +S D N+ H S+E  ILEDP
Sbjct:   16 LDTSCILAWLIEE-GWEVICYMANVGQE-EDWDAAREKALKVGAKKVYVEDLREEFINDTVIPAAQANAIYENVYLLGTSLARPIIARRQIQIAEKENCIAVSHGCTGKGNDQVRFELAYYALKPDVQVIAPWRLPVFFERFAGRKDLLEYAAAKGIPVTQTTKKPWSMDENIVHCSYEAGILEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROM1 (Argininosuccinate synthase OS=Prochlorococcus marinus (strain NATL1A) GN=argG PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.568e-45
Identity = 90/183 (49.18%), Postives = 134/183 (73.22%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ YG E V+ F AD+GQG  ELD +++KA ++GA + ++ +L + F++D+ FP +R+ A+Y+ +Y L T++ARP+IAK +V++ARE+ AD VAHGCTGKGNDQVRF++T  AL P+L ++ P REW +  RE+ I Y +K+ +  PV+KK+ YS D NL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKKEYGVEHVIAFAADLGQG-DELDQIKQKAISAGASESLIGNLVKPFIEDFAFPAIRSNALYQGRYPLSTALARPLIAKNLVEIARELNADGVAHGCTGKGNDQVRFDVTIGALAPDLQLLTPAREWGM-SREETIAYGEKYGIVPPVSKKTPYSIDLNLLGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_MICAN (Argininosuccinate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=argG PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.568e-45
Identity = 94/183 (51.37%), Postives = 128/183 (69.95%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L++ +G E V+   AD+GQG  EL  ++EKA   GA + +V + +EEFVK+Y FP ++A A+YE +Y L T++ARP+IAK +V+ A + GADAV+HGCTGKGNDQVRF++   ALNP L V+AP REW +  RE+ I Y +K  +  PV K S +S DRNL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKQEWGVEEVITLAADLGQG-DELGPIQEKALRCGAIESLVVNAQEEFVKEYAFPSIQANALYENRYPLSTALARPLIAKLLVEAAEKYGADAVSHGCTGKGNDQVRFDVGIMALNPSLKVLAPAREWGM-SREETIAYGEKFGIESPVKKSSPFSIDRNLLGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DEHE1 (Argininosuccinate synthase OS=Dehalococcoides ethenogenes (strain 195) GN=argG PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.568e-45
Identity = 90/182 (49.45%), Postives = 126/182 (69.23%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS  V WL+E YG +V+  T DVG   K+   ++EKA   GA +  V+D+++EF +DYI+  ++A ++YE  Y L T++ARP+IAK MVD+A E GA A+AHGCTGKGNDQVRF++    L P L ++AP R+W +  RE  +EYA+K  +PVP++ K+ +S D NLW  S E  +LEDP
Sbjct:   13 LDTSAAVKWLQEKYGMDVIAVTIDVGNE-KDFTLIKEKALKVGAKKAYVRDVRKEFAEDYIWKAIKANSMYEGVYPLATALARPLIAKVMVDIAMEEGATAIAHGCTGKGNDQVRFDVGINTLAPHLKIIAPARQWGMT-REQTMEYAQKWGIPVPISVKNPFSIDENLWGRSIECGLLEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DEHSC (Argininosuccinate synthase OS=Dehalococcoides sp. (strain CBDB1) GN=argG PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.660e-45
Identity = 90/182 (49.45%), Postives = 126/182 (69.23%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS  V WL+E YG +V+  T DVG   K+   ++EKA   GA +  V+D+++EF +DYI+  ++A ++YE  Y L T++ARP+IAK MVD+A E GA A+AHGCTGKGNDQVRF++    L P L ++AP R+W +  RE  +EYA+K  +PVP++ K+ +S D NLW  S E  +LEDP
Sbjct:   13 LDTSAAVKWLQEKYGMDVIAVTIDVGNE-KDFTLIKEKALKVGAKKAYVRDVRKEFAEDYIWKAIKANSMYEGVYPLATALARPLIAKVMVDIALEEGATAIAHGCTGKGNDQVRFDVGINTLAPHLKIIAPARQWGMT-REQTMEYAQKWGIPVPISVKNPFSIDENLWGRSIECGLLEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DEHSB (Argininosuccinate synthase OS=Dehalococcoides sp. (strain BAV1) GN=argG PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.660e-45
Identity = 90/182 (49.45%), Postives = 126/182 (69.23%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS  V WL+E YG +V+  T DVG   K+   ++EKA   GA +  V+D+++EF +DYI+  ++A ++YE  Y L T++ARP+IAK MVD+A E GA A+AHGCTGKGNDQVRF++    L P L ++AP R+W +  RE  +EYA+K  +PVP++ K+ +S D NLW  S E  +LEDP
Sbjct:   13 LDTSAAVKWLQEKYGMDVIAVTIDVGNE-KDFTLIKEKALKVGAKKAYVRDVRKEFAEDYIWKAIKANSMYEGVYPLATALARPLIAKVMVDIALEEGATAIAHGCTGKGNDQVRFDVGINTLAPHLKIIAPARQWGMT-REQTMEYAQKWGIPVPISVKNPFSIDENLWGRSIECGLLEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ACAM1 (Argininosuccinate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=argG PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.660e-45
Identity = 94/183 (51.37%), Postives = 127/183 (69.40%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTSV +P+L+  +G E V+   AD+GQG  EL+ + +KA  +GA Q ++ D  E F+ DY FP ++A A+YE +Y L T++ARP+IAK +V+ A   GADAVAHGCTGKGNDQVRF+++  ALNP++ V+AP REW +  RE+ I Y +K+ V  PV K S YS DRNL   S E   LEDP
Sbjct:   15 VDTSVCIPYLKHEWGVEEVITLAADLGQG-DELEPIRKKALDAGAAQSLIADGTESFIADYAFPAIQANALYENRYPLSTALARPLIAKLLVEAAEIHGADAVAHGCTGKGNDQVRFDVSITALNPDIKVLAPAREWGM-SREETIAYGEKYGVQSPVKKSSPYSIDRNLLGRSVEAGPLEDP 195          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_BACSK1.601e-4550.00Argininosuccinate synthase OS=Bacillus clausii (st... [more]
ASSY_HUMAN2.092e-4546.77Argininosuccinate synthase OS=Homo sapiens GN=ASS1... [more]
ASSY_SYNY32.732e-4552.46Argininosuccinate synthase OS=Synechocystis sp. (s... [more]
ASSY_SCHPO3.568e-4550.00Argininosuccinate synthase OS=Schizosaccharomyces ... [more]
ASSY_PROM13.568e-4549.18Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_MICAN3.568e-4551.37Argininosuccinate synthase OS=Microcystis aerugino... [more]
ASSY_DEHE13.568e-4549.45Argininosuccinate synthase OS=Dehalococcoides ethe... [more]
ASSY_DEHSC4.660e-4549.45Argininosuccinate synthase OS=Dehalococcoides sp. ... [more]
ASSY_DEHSB4.660e-4549.45Argininosuccinate synthase OS=Dehalococcoides sp. ... [more]
ASSY_ACAM14.660e-4551.37Argininosuccinate synthase OS=Acaryochloris marina... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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