CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_STRMU (Argininosuccinate synthase OS=Streptococcus mutans GN=argG PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 7.948e-45
Identity = 89/182 (48.90%), Postives = 129/182 (70.88%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL+++Y    VC   DVG+G K+L+ + +KA   GA +  V D+K+EF ++Y+ P L+A A YE+KY L ++++RPVI+K +V++A + GA  +AHGCTGKGNDQVRFE+   AL+P+L V+AP REW    RE+ I YAK++ VPVP    + YS D+NLW  ++E  +LE+P
Sbjct:   14 LDTSVAITWLKKDYDVVAVCM--DVGEG-KDLEFIHDKALKVGAIESYVLDIKDEFAEEYVLPALQAHAYYEQKYPLVSALSRPVISKKLVEIAHQTGATTIAHGCTGKGNDQVRFEVAIAALDPKLKVIAPVREWK-WSREEEINYAKENGVPVPADLDNPYSVDQNLWGRANECGVLENP 191          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_EXIS2 (Argininosuccinate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=argG PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.038e-44
Identity = 93/182 (51.10%), Postives = 128/182 (70.33%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL ++Y  +VV    DVG+G K+L  ++EKA   GA + +V D+K+EF  D++ P L+ GA YE  Y L ++++RP+IA+ +V+VA   GA AVAHGCTGKGNDQVRFE++  AL+P L V+AP REW    RE+ I YAK++NVP+P+   S YS D NLW  S+E  +LE+P
Sbjct:   14 LDTSVAIKWLSKDY--DVVALCMDVGEG-KDLSVIKEKALLVGAIESIVLDVKDEFANDFVLPALQYGAHYEGAYPLISALSRPLIAEKLVEVAHAQGATAVAHGCTGKGNDQVRFEVSVAALDPSLEVIAPVREWK-WSREEEIAYAKENNVPIPINLNSPYSIDMNLWGRSNECGVLENP 191          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THELT (Argininosuccinate synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=argG PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.356e-44
Identity = 92/186 (49.46%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL E  G EV+ F A++GQ  ++   +E KA ++GA ++ V+DL+ EFV +++FP L   A+YE +YLLGT+++RP+IAK  V++A +  A  VAHG TGKGNDQVRFELT+ ALNP L V++PW++ +     +GR D + YAK+  +    T +  YS D NL H+SHEG  LEDP
Sbjct:   12 LDTSVILKWLSEK-GFEVIAFVANLGQK-EDFKAIECKALSTGASKVYVEDLRREFVTEFVFPALMGNALYEGRYLLGTALSRPLIAKKQVEIAEKENAAFVAHGATGKGNDQVRFELTYAALNPFLKVLSPWKDIEFLKLFKGRTDLLAYAKQKCILTRATIEKPYSEDENLMHISHEGGKLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ANOFW (Argininosuccinate synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=argG PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.356e-44
Identity = 95/182 (52.20%), Postives = 129/182 (70.88%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL+E  G +VV    DVG+G K+L+ ++EKA   GA +  + D KEEF  +Y    L+A A+YE KY L ++++RP+I+K +V++A   GA AVAHGCTGKGNDQVRFE++  ALNP L V+AP REW    RE+ IEYAK+H++P+P+   S +S D+NLW  S+E  ILEDP
Sbjct:   14 LDTSVAIKWLQEQ-GYDVVACCLDVGEG-KDLEFVKEKALKVGAVKSYMIDAKEEFANEYALIALQAHALYEGKYPLISALSRPLISKKLVEIAELEGAVAVAHGCTGKGNDQVRFEVSIQALNPNLKVIAPVREWK-WSREEEIEYAKQHDIPIPIDLDSPFSIDQNLWGRSNECGILEDP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AEDAE (Argininosuccinate synthase OS=Aedes aegypti GN=AAEL004701 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.771e-44
Identity = 87/186 (46.77%), Postives = 129/186 (69.35%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWD----IQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+ WL E  G EV+CF ADVGQ  ++     EKA   GA  +++KD+K  FV+ +++P ++ G +YE +YLLGTS+ARP I+  +++ A E     ++HG TGKGNDQ+RFEL+ +AL+P++ V+APWR  +     QGR+D ++YA+KH +PV  T K+ +S D N+ H+S+E  ILE+P
Sbjct:   15 LDTSCILKWLLEK-GYEVICFMADVGQE-EDFVAAREKALRVGAKDVIIKDMKRIFVEKFVWPAIQMGLVYEDRYLLGTSLARPCISIGLMESAAEHSCSIISHGATGKGNDQIRFELSCYALDPKIKVIAPWRLPEFCERFQGRKDLLDYAQKHGIPVSATPKAPWSMDANIMHISYESGILENP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PROMA (Argininosuccinate synthase OS=Prochlorococcus marinus GN=argG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.313e-44
Identity = 91/183 (49.73%), Postives = 127/183 (69.40%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCE-VVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            +DTS  +P+L+  YG E ++ F AD+GQG +EL+ + +KA  +GA + +V DL E F+ D+ FP +RA A+YE +Y L T++ARP+IA  +V++ARE+ A AVAHGCTGKGNDQVRF+L   +L P L ++ P REW +  R++ I Y +K  +P PV+KKS YS D NL   S E   LEDP
Sbjct:   15 VDTSACIPYLKNEYGVEEIIAFAADLGQG-EELEVVRKKALLAGAKESLVDDLIEPFIHDFAFPAIRANALYEGRYPLSTALARPLIASRLVELAREMEAGAVAHGCTGKGNDQVRFDLAISSLAPHLKILTPAREWSM-SRQELISYGEKFGIPAPVSKKSPYSIDLNLLGRSIEAGPLEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LISMH (Argininosuccinate synthase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=argG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.313e-44
Identity = 94/182 (51.65%), Postives = 127/182 (69.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL E+ G EV+    DVG+G K LD ++EKA   GA +    D KEEF +D+    L+A A YE KY L ++++RP+IAK +V+VAR+ GA A+AHGCTGKGNDQVRFE+   AL P+L VV+P R+W    RE+ I YAK+HN+PVP+   + +S D+NLW  S+E  +LE+P
Sbjct:   14 LDTSVAIQWLVES-GYEVIACCLDVGEG-KNLDFIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLVEVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWK-WSREEEINYAKEHNIPVPIDLDNPFSIDQNLWGRSNECGVLENP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LISMF (Argininosuccinate synthase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=argG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.313e-44
Identity = 94/182 (51.65%), Postives = 127/182 (69.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL E+ G EV+    DVG+G K LD ++EKA   GA +    D KEEF +D+    L+A A YE KY L ++++RP+IAK +V+VAR+ GA A+AHGCTGKGNDQVRFE+   AL P+L VV+P R+W    RE+ I YAK+HN+PVP+   + +S D+NLW  S+E  +LE+P
Sbjct:   14 LDTSVAIQWLVES-GYEVIACCLDVGEG-KNLDFIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLVEVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWK-WSREEEINYAKEHNIPVPIDLDNPFSIDQNLWGRSNECGVLENP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LISMC (Argininosuccinate synthase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=argG PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.313e-44
Identity = 94/182 (51.65%), Postives = 127/182 (69.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL E+ G EV+    DVG+G K LD ++EKA   GA +    D KEEF +D+    L+A A YE KY L ++++RP+IAK +V+VAR+ GA A+AHGCTGKGNDQVRFE+   AL P+L VV+P R+W    RE+ I YAK+HN+PVP+   + +S D+NLW  S+E  +LE+P
Sbjct:   14 LDTSVAIQWLVES-GYEVIACCLDVGEG-KNLDFIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLVEVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWK-WSREEEINYAKEHNIPVPIDLDNPFSIDQNLWGRSNECGVLENP 192          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LISW6 (Argininosuccinate synthase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=argG PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.020e-44
Identity = 93/182 (51.10%), Postives = 127/182 (69.78%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSV + WL E+ G EV+    DVG+G K LD ++EKA   GA +    D KEEF +D+    L+A A YE KY L ++++RP+IAK +V+VAR+ GA A+AHGCTGKGNDQVRFE+   AL P+L V++P R+W    RE+ I YAK+HN+PVP+   + +S D+NLW  S+E  +LE+P
Sbjct:   14 LDTSVAIQWLVES-GYEVIACCLDVGEG-KNLDFIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLVEVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVISPVRDWK-WSREEEINYAKEHNIPVPIDLDNPFSIDQNLWGRSNECGVLENP 192          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_STRMU7.948e-4548.90Argininosuccinate synthase OS=Streptococcus mutans... [more]
ASSY_EXIS21.038e-4451.10Argininosuccinate synthase OS=Exiguobacterium sibi... [more]
ASSY_THELT1.356e-4449.46Argininosuccinate synthase OS=Thermotoga lettingae... [more]
ASSY_ANOFW1.356e-4452.20Argininosuccinate synthase OS=Anoxybacillus flavit... [more]
ASSY_AEDAE1.771e-4446.77Argininosuccinate synthase OS=Aedes aegypti GN=AAE... [more]
ASSY_PROMA2.313e-4449.73Argininosuccinate synthase OS=Prochlorococcus mari... [more]
ASSY_LISMH2.313e-4451.65Argininosuccinate synthase OS=Listeria monocytogen... [more]
ASSY_LISMF2.313e-4451.65Argininosuccinate synthase OS=Listeria monocytogen... [more]
ASSY_LISMC2.313e-4451.65Argininosuccinate synthase OS=Listeria monocytogen... [more]
ASSY_LISW63.020e-4451.10Argininosuccinate synthase OS=Listeria welshimeri ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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