CB304754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHOPB (Argininosuccinate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=argG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12 Identity = 53/189 (28.04%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+++ G V +TA++GQ + + D + KA GA + + D + + V + I +++GA + Y T + R V +V +E G + G T KGND RF NP+L + PW + ++ GR + + H ++ + YS D NL +HE LE Sbjct: 22 LDTSAALLWMKQK-GARVFAYTANLGQPDEADYDEIPRKAMEFGAEKARLVDCRSQLVHEGI-AAIQSGAFHVSTGGVAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQQFIDELGGRAEMSAFMTAHGFAYKMSSEKAYSTDSNLLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_OLICO (Argininosuccinate synthase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=argG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12 Identity = 53/189 (28.04%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+++ G V +TA++GQ + + D + KA GA + + D + + V + I +++GA + Y T + R V +V +E G + G T KGND RF NPEL + PW + ++ GR + + H ++ + YS D N+ +HE LE Sbjct: 22 LDTSAALLWMKQK-GARVFAYTANLGQPDEADYDEIPRKALEFGAEKARLVDCRTQLVHEGI-AAIQSGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPELRIYKPWLDQQFIDELGGRAEMSAFMTAHGFAYKMSAEKAYSTDSNILGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SOLUE (Argininosuccinate synthase OS=Solibacter usitatus (strain Ellin6076) GN=argG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12 Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+R G +TA++GQ + + D + +A GA + + D +++ V + I L++GA + Y T + R V +V +E G T KGND RF NP L + PW + ++ GR++ EY H + ++ + YS D N+W +HE LE Sbjct: 22 LDTSAAIHWMRAK-GAIPYSYTANLGQPDEPDYDEIPRRALLYGAEKARLIDCRKQLVAEGI-AALQSGAFHISTAGVHYFNTTPIGRAVTGTMLVIAMKEDDVHIWGDGSTFKGNDIERFYRYGLLANPALRIYKPWLDQTFIDELGGRKEMSEYMISHGLTYKMSVEKAYSTDSNIWGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BORPD (Argininosuccinate synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=argG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12 Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKE-LDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+R N G +TA++GQ ++ D + +A GA + D + + V + I L+AGA + Y T + R V +V +E G + G T KGND RF NP+L + PW + ++ GR + EY ++ ++ + YS D N+ +HE LE Sbjct: 22 LDTSAALLWMR-NKGAIPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRAQLVAEGI-AALQAGAFHVSTAGITYFNTTPIGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPDLKIYKPWLDQLFIDELGGRAEMSEYMRQAGFDYKMSAEKAYSTDSNMLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_RHOP5 (Argininosuccinate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=argG PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.158e-11 Identity = 53/189 (28.04%), Postives = 86/189 (45.50%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+++ G V +TA++GQ + + D + KA GA + + D + + V + I ++AGA + Y T + R V +V +E G + G T KGND RF NP+L + PW + ++ GR + + ++ + YS D NL +HE LE Sbjct: 22 LDTSAALLWMKQK-GARVFAYTANLGQPDEADYDEIPRKAMEFGAEKARLVDCRSQLVHEGI-AAIQAGAFHVSTGGIAYFNTTPLGRAVTGTMLVSAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPDLRIYKPWLDQQFIDELGGRAEMSAFMTAAGFAYKMSSEKAYSTDSNLLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BORPE (Argininosuccinate synthase OS=Bordetella pertussis GN=argG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+R+ G +TA++GQ + + D + +A GA + D + + V + I L+AGA + Y T + R V +V +E G + G T KGND RF NP+L + PW + ++ GR + EY ++ ++ + YS D N+ +HE LE Sbjct: 22 LDTSAALLWMRQK-GAVPYAYTANLGQPDEPDYDEIPRRAMQYGAEAARLVDCRAQLVAEGI-AALQAGAFHISTAGLTYFNTTPIGRAVTGTMLVAAMKEDGVNIWGDGSTFKGNDIERFYRYGLLTNPDLKIYKPWLDQTFIDELGGRAEMSEYMRQAGFDYKMSAEKAYSTDSNMLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BORPA (Argininosuccinate synthase OS=Bordetella parapertussis GN=argG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+R+ G +TA++GQ + + D + +A GA + D + + V + I L+AGA + Y T + R V +V +E G + G T KGND RF NP+L + PW + ++ GR + EY ++ ++ + YS D N+ +HE LE Sbjct: 22 LDTSAALLWMRQK-GAVPYAYTANLGQPDEPDYDEIPRRAMQYGAEAARLVDCRAQLVAEGI-AALQAGAFHISTAGLTYFNTTPIGRAVTGTMLVAAMKEDGVNIWGDGSTFKGNDIERFYRYGLLTNPDLKIYKPWLDQTFIDELGGRAEMSEYMRQAGFDYKMSAEKAYSTDSNMLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BORBR (Argininosuccinate synthase OS=Bordetella bronchiseptica GN=argG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERK----YLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+R+ G +TA++GQ + + D + +A GA + D + + V + I L+AGA + Y T + R V +V +E G + G T KGND RF NP+L + PW + ++ GR + EY ++ ++ + YS D N+ +HE LE Sbjct: 22 LDTSAALLWMRQK-GAVPYAYTANLGQPDEPDYDEIPRRAMQYGAEAARLVDCRAQLVAEGI-AALQAGAFHISTAGLTYFNTTPIGRAVTGTMLVAAMKEDGVNIWGDGSTFKGNDIERFYRYGLLTNPDLKIYKPWLDQTFIDELGGRAEMSEYMRQAGFDYKMSAEKAYSTDSNMLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BRASO (Argininosuccinate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=argG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11 Identity = 52/189 (27.51%), Postives = 86/189 (45.50%), Query Frame = -1 Query: 38 LDTSVIVPWLRENYGCEVVCFTADVGQGIK-ELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIY----ERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREW----DIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577 LDTS + W+++ G +TA++GQ + + D + KA + GA + + D + + V + I +++GA + Y T + R V +V +E G + G T KGND RF NP L + PW + ++ GR + + H ++ + YS D NL +HE LE Sbjct: 22 LDTSAALLWMKQK-GARCFAYTANLGQPDESDYDEIPRKAMSFGAEKARLVDCRTQLVHEGI-AAIQSGAFHISTGGATYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQQFIDELGGRAEMSAFLTAHGFNYKMSAEKAYSTDSNLLGATHEAKDLE 208
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_XYLFT (Argininosuccinate synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=argG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11 Identity = 57/183 (31.15%), Postives = 90/183 (49.18%), Query Frame = -1 Query: 50 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKD----LKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAI---EYAKKHNVPVPVTKKSIYSRDRNLWHLSHEG 577 LDTS +P+L+E F G E D +E++A G + D + + FVK ++ AG Y+ +Y L S R +I A++ A +G AVAHGCTG GNDQVRF+L A + ++AP RE + + + +Y ++ V +K+ Y+ + NL ++ G Sbjct: 14 LDTSFCIPYLKEQGYAVHTVFADTGGVDEDERDFIEKRAAELGVASHLTVDGGPAIWDGFVKQLVW----AGEAYQGQYPLLVS-DRYLIVDAVLQRADALGTCAVAHGCTGMGNDQVRFDLAIKA-QGDYTIIAPIREIQKEHTQTRLYEQKYLEERGFGVRAKQKN-YTINENLLGITLSG 189 The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bpback to top |