CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SYNAS (Argininosuccinate synthase OS=Syntrophus aciditrophicus (strain SB) GN=argG PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.452e-63
Identity = 112/184 (60.87%), Postives = 144/184 (78.26%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWRE--WDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVIV WL E YGCEV+ F ADVGQ  +EL+GL EKA  +GA ++ ++DL+EEF +D++FP LRA AIYE  YLLGTS+ARP+IAK  V++AR  GADAV HG TGKGNDQVRFELT+ AL P + +++ W++  W  + RED  +YA+KHN+P+P+T++  YS DRNL H+SHEG ILEDP
Sbjct:   16 LDTSVIVQWLIETYGCEVIAFAADVGQK-EELEGLREKAIKTGASKIYIEDLREEFARDFVFPALRANAIYEGTYLLGTSLARPLIAKRQVEIARAEGADAVCHGATGKGNDQVRFELTYMALEPNIRIISAWKDPNWHFKSREDMFDYAEKHNIPLPLTREKPYSSDRNLLHISHEGAILEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ERWT9 (Argininosuccinate synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=argG PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.452e-63
Identity = 110/183 (60.11%), Postives = 142/183 (77.60%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENYG CEVV F AD+GQ   +L+G+E+KA  SGA +  V DL+EEF+ +Y++P L+ GA+YE  YLLGTSMARP+IAKA V++A +VGADA+ HG TGKGNDQVRFE T+ AL P+L VVAPWREWD++ RE  ++Y K+ N+P   + + IYSRD N WH+S EG +LE P
Sbjct:   17 LDTSAIIPWLKENYGGCEVVAFVADIGQERGDLEGVEQKALQSGASECHVVDLREEFISEYVYPVLQTGALYEGTYLLGTSMARPIIAKAQVELALKVGADALCHGATGKGNDQVRFETTYTALAPQLKVVAPWREWDLRSREALLDYLKERNIPTTASLEKIYSRDENAWHISTEGGVLESP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AERHH (Argininosuccinate synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=argG PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.452e-63
Identity = 111/180 (61.67%), Postives = 138/180 (76.67%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTS I+PWL+ENY  E++ F ADVGQ   +L+G+E+KA ASGA + +VKDL+EEFVK+Y++P L+ GA+YE  YLLGTSMARPVIAKAMV+ A   GADA++HGCTGKGNDQVRFE    AL P+L V+APWR WD++ RED + Y +  N+P   T K IYSRD N WH+S EG  LE
Sbjct:   15 LDTSAIIPWLKENYDAEIIAFVADVGQERDDLEGIEQKAIASGATKCIVKDLREEFVKEYVYPTLKTGAVYEGTYLLGTSMARPVIAKAMVEAALAEGADAISHGCTGKGNDQVRFEGAVAALAPQLKVIAPWRLWDMRSREDLLAYLETRNIPCKATLKKIYSRDANAWHISTEGGELE 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_UNCTG (Argininosuccinate synthase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=argG PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.104e-62
Identity = 110/181 (60.77%), Postives = 142/181 (78.45%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+ W++ENYGCEVV    DVGQG KEL+GL+EKAK +GA +  + D K+EFV +YI+P ++  A+YE KY LGTS+ARP+IA+ + DV ++  ADAV HG TGKGNDQVRFEL F +L P + ++APWREWDI+ REDAI+YAKK ++ VPVTK   YS D NLWH+S+EG +LED
Sbjct:   27 LDTSIILSWVKENYGCEVVACCVDVGQG-KELEGLDEKAKKTGASKSYIIDAKKEFVTNYIYPTIKVNALYENKYYLGTSLARPIIAEKIADVVKKEKADAVCHGATGKGNDQVRFELAFKSLMPNVKIIAPWREWDIKSREDAIDYAKKRDISVPVTKAKPYSSDANLWHISYEGGVLED 206          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_EDWI9 (Argininosuccinate synthase OS=Edwardsiella ictaluri (strain 93-146) GN=argG PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.104e-62
Identity = 110/183 (60.11%), Postives = 141/183 (77.05%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYG-CEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENYG CEV+ F AD+GQ  ++L G+E+KA  SGA    V DL+E F+KDY++P L++GA+YE  YLLGTSMARP+IAKA V++A E+GADA+ HG TGKGNDQVRFE T+ AL P+L VVAPWREWD++ RE  ++Y K  ++P   T + IYSRD N WH+S EG +LE P
Sbjct:   17 LDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGIEQKALRSGAASCYVVDLRETFIKDYVYPVLKSGALYEGSYLLGTSMARPLIAKAQVELALELGADALCHGATGKGNDQVRFETTYTALAPQLQVVAPWREWDLRSREALLDYLKGRDIPTTATLEKIYSRDANAWHISTEGGVLESP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_DESAA (Argininosuccinate synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=argG PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.883e-62
Identity = 109/182 (59.89%), Postives = 143/182 (78.57%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL E Y CEVV F+AD+GQG +EL+ +  KA+ASGAC + + DL+EEFVKDY+FP  RA AIYE +YLLGTS+ARP+I+K  +++A+  GADAV+HG TGKGNDQVRFEL++ A++P + ++APWREWD+  R   + YA+KH +PVP T+   YS DRNL H+S EG +LEDP
Sbjct:   16 LDTSVILKWLVETYQCEVVAFSADIGQG-EELEPVRGKAEASGACAVYIDDLREEFVKDYVFPAFRANAIYEGQYLLGTSLARPLISKRQMEIAKLEGADAVSHGATGKGNDQVRFELSYLAIDPAIKIIAPWREWDLNSRTKLMAYAEKHGIPVPTTQAKPYSSDRNLLHISFEGGVLEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_THET8 (Argininosuccinate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=argG PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.459e-62
Identity = 109/182 (59.89%), Postives = 144/182 (79.12%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+ WL+E Y  EV+ FTAD+GQG +E++   EKA  +GA + +  DLKEEFV+D++FP +RAGA+YE  YLLGTS+ARP+IAK +V +A E GA+A+AHG TGKGNDQVRFELT +AL P++ V+APWREW  QGR++ I YA+ H +PVPVT++  YS D NL H+S+EG +LEDP
Sbjct:   11 LDTSIILKWLKETYRAEVIAFTADIGQG-EEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVPVTQEKPYSMDANLLHISYEGGVLEDP 191          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_MORAB (Argininosuccinate synthase OS=Moritella abyssi GN=argG PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.212e-62
Identity = 114/184 (61.96%), Postives = 140/184 (76.09%), Query Frame = -1
Query:   32 LDTSVIVPWLRENY-GCEVVC-FTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+PWL+ENY  CE+V  F ADVGQG +EL+G+E KA ASGA +  V DLK+E V++YI+P L+ GA+YE  YLLGTSMAR  IAKA V++AR+VGADA+ HGCTGKGNDQ+RFE  F AL PEL V+APWR WD+  RE  +EY  + ++P   +   IYSRD N WH+SHEG  LEDP
Sbjct:   16 LDTSVILPWLQENYDNCEIVALFVADVGQGAEELEGIEAKALASGASECYVVDLKDELVENYIYPTLKTGAVYEGTYLLGTSMARQSIAKAQVEIARKVGADALCHGCTGKGNDQIRFESCFAALAPELTVIAPWRIWDLTSRESLLEYLAERDIPTAASGTKIYSRDANAWHISHEGGELEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOPE (Argininosuccinate synthase OS=Clostridium perfringens GN=argG PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 9.345e-62
Identity = 108/182 (59.34%), Postives = 143/182 (78.57%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENYGCEV+    +VGQ   EL GL+EKA  +GA ++ ++DL +EFV+DYIFP ++AGA YE KYLLGTS ARP+IAK +V++A+  GADA+ HGCTGKGNDQVRFEL     NPE+ ++APWR W+I+ RE+ I+YA  + VP+ +T ++ YS+D+NLWHLSHEG  LE P
Sbjct:   17 LDTSIIIPWLKENYGCEVIAVVGNVGQS-DELVGLKEKAIKTGASKIYIEDLTKEFVEDYIFPTIQAGAKYEGKYLLGTSFARPIIAKRLVEIAKLEGADAICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEIKSREEEIQYAIDNEVPINITYETNYSKDKNLWHLSHEGLDLEFP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOP1 (Argininosuccinate synthase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=argG PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 9.345e-62
Identity = 108/182 (59.34%), Postives = 143/182 (78.57%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENYGCEV+    +VGQ   EL GL+EKA  +GA ++ ++DL +EFV+DYIFP ++AGA YE KYLLGTS ARP+IAK +V++A+  GADA+ HGCTGKGNDQVRFEL     NPE+ ++APWR W+I+ RE+ I+YA  + VP+ +T ++ YS+D+NLWHLSHEG  LE P
Sbjct:   15 LDTSIIIPWLKENYGCEVIAVVGNVGQS-DELVGLKEKAIKTGASKIYIEDLTKEFVEDYIFPTIQAGAKYEGKYLLGTSFARPIIAKRLVEIAKLEGADAICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEIKSREEEIQYAIDNEVPINITYETNYSKDKNLWHLSHEGLDLEFP 195          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_SYNAS8.452e-6360.87Argininosuccinate synthase OS=Syntrophus aciditrop... [more]
ASSY_ERWT98.452e-6360.11Argininosuccinate synthase OS=Erwinia tasmaniensis... [more]
ASSY_AERHH8.452e-6361.67Argininosuccinate synthase OS=Aeromonas hydrophila... [more]
ASSY_UNCTG1.104e-6260.77Argininosuccinate synthase OS=Uncultured termite g... [more]
ASSY_EDWI91.104e-6260.11Argininosuccinate synthase OS=Edwardsiella ictalur... [more]
ASSY_DESAA1.883e-6259.89Argininosuccinate synthase OS=Desulfatibacillum al... [more]
ASSY_THET82.459e-6259.89Argininosuccinate synthase OS=Thermus thermophilus... [more]
ASSY_MORAB3.212e-6261.96Argininosuccinate synthase OS=Moritella abyssi GN=... [more]
ASSY_CLOPE9.345e-6259.34Argininosuccinate synthase OS=Clostridium perfring... [more]
ASSY_CLOP19.345e-6259.34Argininosuccinate synthase OS=Clostridium perfring... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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