CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11611 contig Csv1_Contig11611:422..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_AERS4 (Argininosuccinate synthase OS=Aeromonas salmonicida (strain A449) GN=argG PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.594e-61
Identity = 108/180 (60.00%), Postives = 138/180 (76.67%), Query Frame = -1
Query:   38 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILE 577
            LDTS I+PWL+E+Y  E++ F ADVGQ   +L+G+E+KA ASGA + +VKDL+EEFVK+Y++P L+ GA+YE  YLLGTSMARP+IAKAMV+ A   GADA++HGCTGKGNDQVRFE    AL P+L V+APWR WD++ RED + Y +  ++P   T K IYSRD N WH+S EG  LE
Sbjct:   20 LDTSAIIPWLKEHYDAEIIAFVADVGQERDDLEGIEQKAIASGAVKCIVKDLREEFVKEYVYPTLKTGAVYEGTYLLGTSMARPIIAKAMVEAALAEGADAISHGCTGKGNDQVRFEGAVAALAPQLKVIAPWRLWDMRSREDLLAYLEARDIPCKATLKKIYSRDANAWHISTEGGELE 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEPIN (Argininosuccinate synthase OS=Leptospira interrogans GN=argG PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.082e-61
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ YGCEV+ FTAD+GQ  +EL GLEEK   +GA ++ ++DL+ EF +D+IFP ++  AIYE +YLLGTS+ARP+IAKAMV+VA + GADA AHG TGKGNDQVRFEL   +L PE  ++APWR W   GR D IEYAK   +PVPVT +  YS DRNL H+S+EG ILEDP
Sbjct:   18 LDTSVILTWLKDTYGCEVIAFTADIGQK-EELSGLEEKGIKTGASKVYIQDLRLEFARDFIFPAIQGNAIYEMRYLLGTSLARPLIAKAMVEVAEKEGADAFAHGATGKGNDQVRFELGVKSLAPEKTIIAPWRIWSFGGRSDLIEYAKSKGIPVPVTAEKPYSMDRNLMHISYEGGILEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEPIC (Argininosuccinate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=argG PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.082e-61
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ YGCEV+ FTAD+GQ  +EL GLEEK   +GA ++ ++DL+ EF +D+IFP ++  AIYE +YLLGTS+ARP+IAKAMV+VA + GADA AHG TGKGNDQVRFEL   +L PE  ++APWR W   GR D IEYAK   +PVPVT +  YS DRNL H+S+EG ILEDP
Sbjct:   18 LDTSVILTWLKDTYGCEVIAFTADIGQK-EELSGLEEKGIKTGASKVYIQDLRLEFARDFIFPAIQGNAIYEMRYLLGTSLARPLIAKAMVEVAEKEGADAFAHGATGKGNDQVRFELGVKSLAPEKTIIAPWRIWSFGGRSDLIEYAKSKGIPVPVTAEKPYSMDRNLMHISYEGGILEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ACIBL (Argininosuccinate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=argG PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.551e-61
Identity = 106/182 (58.24%), Postives = 140/182 (76.92%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+I+PWL+ENY C+V+    DVGQG  ++D +  KA  +GA +++VKDL+EEF+  Y++P +  GA+YE KYLLGTS+ARP IAKA V+VA   GA AV+HGCTGKGNDQVRFE  F AL PEL ++APWREW ++ RED ++YA+ H + V  +++ I+SRDRNL H+SHEG  LEDP
Sbjct:   13 LDTSIIIPWLKENYSCDVIAMVGDVGQG-DDIDAVVAKAHKTGASKVIVKDLREEFLTQYVYPAISTGAVYEHKYLLGTSLARPPIAKAQVEVALAEGATAVSHGCTGKGNDQVRFEHAFQALAPELKIIAPWREWTLKSREDCLDYAEAHGISVAQSREKIHSRDRNLLHVSHEGGELEDP 193          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_SACD2 (Argininosuccinate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=argG PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.911e-61
Identity = 110/185 (59.46%), Postives = 142/185 (76.76%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT---KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVIV WL+E Y CEVV FTAD+GQG +E++    KA+A G  ++ + DL+EEFV+DY+FP  RA  IYE +YLLGTS+ARP+IAK ++++A E GADA++HG TGKGNDQVRFEL  +AL P ++V+APWR+WD+  RE  ++Y  KHN+PV  T   KKS YS D NL H+S+EG ILEDP
Sbjct:   18 LDTSVIVKWLQETYNCEVVTFTADIGQG-EEVEPARAKAEALGVKEIYIDDLREEFVRDYVFPMFRANTIYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGIHVIAPWRDWDLTSRETLMDYCAKHNIPVDYTKAKKKSPYSMDANLLHISYEGGILEDP 201          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CLOPH (Argininosuccinate synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=argG PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 7.911e-61
Identity = 112/185 (60.54%), Postives = 138/185 (74.59%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWR---EWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDT+ I+PWL+ENY  +VVC   DVGQG  ELDGLEE+AK SGA +L ++ + +EFV +Y+ PC++AGA+YE KYLLGTSMARPVIAK +V+VA +  A A+ HG TGKGNDQVRFEL   AL P+L ++APWR    W +Q RED IEY K H + +P      YSRDRNLWH+SHEG  LEDP
Sbjct:   13 LDTTAIIPWLKENYDYDVVCCCIDVGQG-NELDGLEERAKLSGATKLYIEHVTDEFVDEYVMPCVKAGAVYENKYLLGTSMARPVIAKKLVEVAIKENAVAICHGATGKGNDQVRFELGIKALAPDLKIIAPWRCNNTWKMQSREDEIEYCKAHGIDLPFDASHSYSRDRNLWHISHEGLELEDP 196          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEPBL (Argininosuccinate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=argG PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.349e-60
Identity = 111/182 (60.99%), Postives = 140/182 (76.92%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+E YGCEV+ FTADVGQ  +EL GLEEK   +GA ++ ++DL+ EF +D+IFP ++  A+YE +YLLGTS+ARP+IAKAMV+VA + GADA AHG TGKGNDQVRFEL   +L PE  ++APWR W+  GR D IEYAK   +PV +T +  YS DRNL H+S+EG ILEDP
Sbjct:   18 LDTSVILTWLKETYGCEVIAFTADVGQK-EELSGLEEKGIKTGASKVYIQDLRLEFARDFIFPAIQGNALYEMRYLLGTSLARPLIAKAMVEVAEKEGADAFAHGATGKGNDQVRFELGVKSLAPEKTIIAPWRIWNFGGRSDLIEYAKSKGIPVSITVEKPYSMDRNLMHISYEGGILEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_LEPBJ (Argininosuccinate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=argG PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.349e-60
Identity = 111/182 (60.99%), Postives = 140/182 (76.92%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+E YGCEV+ FTADVGQ  +EL GLEEK   +GA ++ ++DL+ EF +D+IFP ++  A+YE +YLLGTS+ARP+IAKAMV+VA + GADA AHG TGKGNDQVRFEL   +L PE  ++APWR W+  GR D IEYAK   +PV +T +  YS DRNL H+S+EG ILEDP
Sbjct:   18 LDTSVILTWLKETYGCEVIAFTADVGQK-EELSGLEEKGIKTGASKVYIQDLRLEFARDFIFPAIQGNALYEMRYLLGTSLARPLIAKAMVEVAEKEGADAFAHGATGKGNDQVRFELGVKSLAPEKTIIAPWRIWNFGGRSDLIEYAKSKGIPVSITVEKPYSMDRNLMHISYEGGILEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ALKMQ (Argininosuccinate synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=argG PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.762e-60
Identity = 106/182 (58.24%), Postives = 139/182 (76.37%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL E YG EV+    +VGQ  ++   +++KA A+GA +  + D+ EEF+ DYIFP L+AGA+YE  YLLGTS ARP+I+K +V++A + GA A+AHG TGKGNDQVRFE T  ALNP L ++APWR WD++ RED I+YA +H +P+PVTKK IYSRD N+WH+SHEG  LE+P
Sbjct:   17 LDTSVILKWLEETYGYEVIAACVNVGQ-TEDFAAIKKKALATGASKAYIVDVTEEFITDYIFPTLKAGAVYEDDYLLGTSFARPLISKKLVEIAEKEGAVAIAHGATGKGNDQVRFEATIKALNPNLKIIAPWRTWDLKSREDCIDYAVQHGIPIPVTKKDIYSRDENIWHISHEGGNLENP 197          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ENTS8 (Argininosuccinate synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=argG PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.302e-60
Identity = 106/183 (57.92%), Postives = 138/183 (75.41%), Query Frame = -1
Query:   32 LDTSVIVPWLRENY-GCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY GC+VV    D+GQ   +L G+E+KA  SGA +  V D +EEF+KDY++P L+ GA+YE  YLLGTSMARP+IAKA+VDVA++VGADA+ HG TGKGNDQVRFE  + AL P L V+APWREW+++ RE  ++Y K  ++P   + + IYSRD N WH+S EG +LE P
Sbjct:   17 LDTSAIIPWLKENYEGCDVVACVVDIGQDRDDLKGVEQKALRSGASECYVVDAREEFIKDYVYPVLQTGALYEGSYLLGTSMARPLIAKALVDVAKKVGADALCHGATGKGNDQVRFESAWAALAPHLKVIAPWREWNLRSREALLDYLKARDIPTTASLEKIYSRDENAWHISTEGGVLESP 199          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_AERS41.594e-6160.00Argininosuccinate synthase OS=Aeromonas salmonicid... [more]
ASSY_LEPIN2.082e-6161.54Argininosuccinate synthase OS=Leptospira interroga... [more]
ASSY_LEPIC2.082e-6161.54Argininosuccinate synthase OS=Leptospira interroga... [more]
ASSY_ACIBL3.551e-6158.24Argininosuccinate synthase OS=Acidobacteria bacter... [more]
ASSY_SACD27.911e-6159.46Argininosuccinate synthase OS=Saccharophagus degra... [more]
ASSY_CLOPH7.911e-6160.54Argininosuccinate synthase OS=Clostridium phytofer... [more]
ASSY_LEPBL1.349e-6060.99Argininosuccinate synthase OS=Leptospira borgpeter... [more]
ASSY_LEPBJ1.349e-6060.99Argininosuccinate synthase OS=Leptospira borgpeter... [more]
ASSY_ALKMQ1.762e-6058.24Argininosuccinate synthase OS=Alkaliphilus metalli... [more]
ASSY_ENTS82.302e-6057.92Argininosuccinate synthase OS=Enterobacter sakazak... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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