CB304754

Overview
NameCB304754
Unique NameCB304754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11611 contig Csv1_Contig11611:422..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_PELPD (Argininosuccinate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=argG PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.926e-60
Identity = 108/181 (59.67%), Postives = 140/181 (77.35%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+ WL+  YGC VV F+AD+GQG +ELD + EKA A+GA  + + DL+EEFV+D++FP  RA AIYE  YLLGTS+ARP+IAK  +++A + G DAV+HG TGKGNDQVRFEL ++  NP + +VAPWR WD+  R+  I+YAKK+ +PVPVTKK  +S DRNL H+S EG ILED
Sbjct:   19 LDTSIILKWLKNEYGCRVVAFSADLGQG-EELDPVREKALATGADVVYIDDLREEFVRDFVFPMFRANAIYEGHYLLGTSIARPLIAKRQMEIAAKEGCDAVSHGSTGKGNDQVRFELGYYHFNPNIKIVAPWRTWDLNSRQALIDYAKKNGIPVPVTKKRPWSSDRNLLHISFEGGILED 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_NITSB (Argininosuccinate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=argG PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.128e-60
Identity = 110/185 (59.46%), Postives = 144/185 (77.84%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGAC--QLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPV-TKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+E Y CEVV FTAD+GQG +E++   EKA   G     + ++DLKEEFV+DY+FP  RA AIYE +YLLGTS+ARP+IAK  +++AR+VGADAVAHG TGKGNDQVRFE+ + +LNP++ V+APWREWD+  RE  +++A++H +P+    KKS YS D NL H+S+EG ILEDP
Sbjct:   16 LDTSVILKWLQETYNCEVVTFTADIGQG-EEVEPAREKALKLGIKPENIFIEDLKEEFVRDYVFPMFRANAIYEGEYLLGTSIARPLIAKRQIEIARQVGADAVAHGATGKGNDQVRFEIAYLSLNPDITVIAPWREWDLNSREKLLKFAEEHRIPIEKHGKKSPYSMDANLLHISYEGGILEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_NITMU (Argininosuccinate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=argG PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60
Identity = 107/184 (58.15%), Postives = 143/184 (77.72%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKK--SIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL++ Y CEVV FTAD+GQG +E++    KAK  G  ++ + DL+EEFV+D++FP  RA  +YE +YLLGTS+ARP+IAK  +++ARE GADAV+HG TGKGNDQVRFEL ++AL P++ V+APWREWD+  RE  ++YA++H +PV + KK  S YS D NL H+S+EG ILEDP
Sbjct:   17 LDTSVILKWLQDTYRCEVVTFTADIGQG-EEVEPARAKAKQLGVREIFIDDLREEFVRDFVFPMFRANTLYEGEYLLGTSIARPLIAKRQIEIARETGADAVSHGATGKGNDQVRFELGYYALQPDIRVIAPWREWDLTSREKLLKYAEQHGIPVEMKKKEGSPYSMDANLLHISYEGRILEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_WOLSU (Argininosuccinate synthase OS=Wolinella succinogenes GN=argG PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.492e-59
Identity = 112/185 (60.54%), Postives = 143/185 (77.30%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQ--LVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT-KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+ WL+E Y CEVV FTAD+GQG +E++    KAK  G  +  + +KDLKEEFV+DY+FP  RA  +YE +YLLGTS+ARP+IAK +V++A+EVGADA++HG TGKGNDQVRFEL  +AL P++ VVAPWREWD+  RE  + YA+KH +P+    KKS YS D NL H+S+EG ILEDP
Sbjct:   16 LDTSVILKWLQEQYQCEVVTFTADIGQG-EEVEPARAKAKLLGIKEENIFIKDLKEEFVRDYVFPMFRANTLYEGEYLLGTSIARPLIAKHLVEIAKEVGADAISHGATGKGNDQVRFELGGYALMPDVKVVAPWREWDLNSREKLLAYAEKHGIPIEKKGKKSPYSMDANLLHISYEGGILEDP 199          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_CHRSD (Argininosuccinate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=argG PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.949e-59
Identity = 108/185 (58.38%), Postives = 142/185 (76.76%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVT---KKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVIV WL+E Y CEVV FTAD+GQG +E++    KA+A G  ++ ++DL+EEFV+DY++P  RA  IYE +YLLGTS+ARP+IAK +V++A E GADA++HG TGKGNDQVRFEL  +AL P + V+APWREWD+  RE  + Y ++H++PV  +   KKS YS D NL H+S+EG ILEDP
Sbjct:   15 LDTSVIVKWLQETYDCEVVTFTADIGQG-EEVEPARAKAQALGVKEIYIEDLREEFVRDYVYPMFRANTIYEGEYLLGTSIARPLIAKRLVEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLMNYCEEHDIPVDFSTSKKKSPYSMDANLLHISYEGGILEDP 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_ANATD (Argininosuccinate synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=argG PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.949e-59
Identity = 104/182 (57.14%), Postives = 139/182 (76.37%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTSVI+PWL+EN+ CEV+    DVGQ   + D ++EKA  +GA ++ ++D KEEFV +YIFP L+AGAIYE KYLLGTSMARP+IAK +V++A++  ADA+AHG TGKGNDQVRFE+T  AL P++ ++APWR W+++ RED + Y  +  + +P  K+  YS D N+WHLSHEG  LEDP
Sbjct:   14 LDTSVIIPWLKENFDCEVIAVVVDVGQE-DDFDAIKEKAYKTGASKVYIEDAKEEFVNEYIFPTLKAGAIYEGKYLLGTSMARPLIAKKLVNIAKKENADAIAHGATGKGNDQVRFEVTIKALMPQIKIIAPWRIWNLKSREDELNYLTQKGIDIPFKKEESYSMDGNIWHLSHEGLDLEDP 194          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_VESOH (Argininosuccinate synthase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=argG PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.545e-59
Identity = 104/185 (56.22%), Postives = 147/185 (79.46%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPV---TKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS+IV WL++ Y CEVV FTAD+GQG +E++    KA+A+G  ++ ++DL+EEF ++++FP  RA AIYE +YLLGTS+ARP+I+K +V++A++VGADA++HG TGKGNDQVRFEL  +ALN ++ V+APWREWD+  RE  ++YA+KH + +     +KKS YS D NL H+S+EG+ILEDP
Sbjct:   17 LDTSIIVKWLQDTYQCEVVTFTADIGQG-EEVEPARVKAEAAGVKEIYIEDLREEFARNFVFPMFRANAIYEGEYLLGTSIARPLISKRLVEIAKQVGADAISHGATGKGNDQVRFELNAYALNADIQVIAPWREWDLSSRESLMDYAQKHGIEIDYKKQSKKSPYSMDANLLHISYEGNILEDP 200          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_GEOSL (Argininosuccinate synthase OS=Geobacter sulfurreducens GN=argG PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.545e-59
Identity = 106/181 (58.56%), Postives = 140/181 (77.35%), Query Frame = -1
Query:   35 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILED 577
            LDTS+I+ WL+  YGCEV+ F+AD+GQG  EL  + +KA A+GA ++ + DLKEEFVKD++FP  RA AIYE  YLLGTS+ARP+IAK  +++A+  GADAV+HG TGKGNDQVRFEL ++  +P + VVAPWREW +  R+  + YA+K+ +P+PVTKK  +S DRNL H+S EG ILED
Sbjct:   19 LDTSIILKWLKNEYGCEVIAFSADLGQG-DELAPIRDKAIATGADKVYIDDLKEEFVKDFVFPMFRANAIYEGHYLLGTSIARPLIAKRQMEIAKIEGADAVSHGATGKGNDQVRFELAYYHFDPAITVVAPWREWKLNSRQALVNYARKNGIPIPVTKKRPWSSDRNLLHISFEGGILED 198          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_EUBE2 (Argininosuccinate synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=argG PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.324e-59
Identity = 104/184 (56.52%), Postives = 141/184 (76.63%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWRE--WDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDT+ I+PWL+E Y  +VVC  AD GQ  +ELDGLE++A + GA +L ++D+ +EF  +YI PC++A A+YE KYLLGTSMARP+IAK +V++AR+ GA A+ HG TGKGNDQ+RFELT  AL P++ ++APWR+  W +Q RED IEY ++H + +P +    YSRDRN+WH+SHEG  LEDP
Sbjct:   13 LDTTAIIPWLKETYNYDVVCVCADCGQE-EELDGLEQRALSCGAAKLYIEDITDEFCDNYIVPCVQAHAVYENKYLLGTSMARPLIAKRLVEIARKEGAVAICHGATGKGNDQIRFELTIKALAPDIKIIAPWRDSNWKLQSREDEIEYCRQHGIHLPFSTDCSYSRDRNIWHISHEGLELEDP 195          
BLAST of CB304754 vs. ExPASy Swiss-Prot
Match: ASSY_BUCAT (Argininosuccinate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=argG PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.324e-59
Identity = 101/182 (55.49%), Postives = 137/182 (75.27%), Query Frame = -1
Query:   32 LDTSVIVPWLRENYGCEVVCFTADVGQGIKELDGLEEKAKASGACQLVVKDLKEEFVKDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAREVGADAVAHGCTGKGNDQVRFELTFFALNPELNVVAPWREWDIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDP 577
            LDTS I+PWL+ENY  EVV F AD+GQ  K+L+G+E+K+  SGA    V DLKEEF+++Y++P L+ GA+YE  YLLGT+MARP+IAK  V++A  +GA+++ HG TGKGNDQVRFE+ + AL P LNV+APWREW++  RE  ++Y  K N+    T + IYS+D N WH+S EG +LE+P
Sbjct:   17 LDTSAIIPWLKENYNFEVVAFVADIGQSKKDLNGIEKKSLESGASSCHVFDLKEEFIENYVYPVLKTGALYEGSYLLGTAMARPIIAKKQVELALNIGANSLCHGATGKGNDQVRFEMAYAALAPNLNVIAPWREWNLNSRESLLKYLDKKNISTTATLEKIYSKDENSWHISTEGGLLENP 198          
The following BLAST results are available for this feature:
BLAST of CB304754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASSY_PELPD3.926e-6059.67Argininosuccinate synthase OS=Pelobacter propionic... [more]
ASSY_NITSB5.128e-6059.46Argininosuccinate synthase OS=Nitratiruptor sp. (s... [more]
ASSY_NITMU6.697e-6058.15Argininosuccinate synthase OS=Nitrosospira multifo... [more]
ASSY_WOLSU1.492e-5960.54Argininosuccinate synthase OS=Wolinella succinogen... [more]
ASSY_CHRSD1.949e-5958.38Argininosuccinate synthase OS=Chromohalobacter sal... [more]
ASSY_ANATD1.949e-5957.14Argininosuccinate synthase OS=Anaerocellum thermop... [more]
ASSY_VESOH2.545e-5956.22Argininosuccinate synthase OS=Vesicomyosocius okut... [more]
ASSY_GEOSL2.545e-5958.56Argininosuccinate synthase OS=Geobacter sulfurredu... [more]
ASSY_EUBE23.324e-5956.52Argininosuccinate synthase OS=Eubacterium eligens ... [more]
ASSY_BUCAT3.324e-5955.49Argininosuccinate synthase OS=Buchnera aphidicola ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_D09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_D09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304754 ID=CB304754; Name=CB304754; organism=Citrus sinensis; type=EST; length=577bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATCTTCCAAGATGTCC
CCCTCATGGCTCAAGTGCCATAAATTCCGGTCTCTACTGTATATGGATTT
TTTTGTTACAGGAACAGGCACGTTGTGCTTCTTAGCATATTCAATAGCAT
CTTCTCTTCCCTGAATATCCCATTCCCTCCATGGAGCCACAACATTCAAC
TCAGGATTTAAAGCAAAGAATGTAAGCTCAAAGCGGACCTGGTCATTTCC
TTTTCCTGTGCACCCATGAGCGACAGCATCAGCTCCAACTTCTCTGGCAA
CATCCACCATGGCCTTGGCAATAACGGGGCGGGCCATTGATGTTCCCAGC
AGATACTTTCTCTCATAAATTGCACCAGCTCGCAAGCAAGGAAATATATA
GTCTTTAACAAATTCCTCCTTCAAATCCTTCACCACTAACTGACAAGCTC
CACTAGCCTTGGCCTTCTCTTCCAATCCATCCAATTCCTTGATTCCTTGA
CCAACATCAGCAGTGAAACAAACAACCTCACAACCATAATTCTCCCTTAG
CCATGGCACAATGACTGAAGTGTCTAA
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