CB304766

Overview
NameCB304766
Unique NameCB304766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig355 contig Csv1_Contig355:1..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 67/121 (55.37%), Postives = 81/121 (66.94%), Query Frame = -2 
Query:  293 YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLD 655
            +KG SFHR+IKDFM+Q           G SIYG  F DE+F   H  P +LSMANAGPNTNGSQFFI T +TP LDN+HVVFG ++ G  +VR++E  ET   D PK P  I++ GELP D
Sbjct:   55 FKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGELPAD 175
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2 
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
The following BLAST results are available for this feature:
BLAST of CB304766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
PPID_YARLI1.345e-3155.37Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIA_PONPY1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_F04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_F04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304766 ID=CB304766; Name=CB304766; organism=Citrus sinensis; type=EST; length=668bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAATTAGCGCTCTGTTG
TATTATTGACTGTTTACTACAAGTGGAATCTGCACATATACATTCAACCG
AACAATAGTACACATTCAGCTCTACCATGAGCTTACCGAGTATTATTCTT
GAGTTTCTCAGCTAATTCAACTAAGCGGAACATGCTTTCATGTAGATAAC
AGTTACAAAAACCATTTGGCTCCACAAAAGTGATGAATTACAAAAGTCGT
ATTTTATGGTTGTGGTAAGATATCAGAGCTGGCAGATCAGGCATCTAATG
GTAGTTCTCCACTATTGATAATTCTACATGGCACCTTTGGGTAATCTGTC
CTGCTTGTCTCTACAGATTCAAGTTTCCTCACGACGTCCATTCCATCAAT
GACATGTCCAAACACAACATGGCGGTTGTCCAACCATGGTGTCTTCACTG
TGCAAATGAAAAATTGGCTCCCATTGGTATTAGGACCTGCATTGGCCATG
CTTAATACTCCAGGTCCAACATGCTTCAAGACAAAGCTCTCATCTTCAAA
GCTGGAACCATAAATACTGATGCCTCCAGTTCCATCTCCCTCAGTGAAGT
CCCCTCCCTGGATCATAAAATCTTTAATAATACGGTGGAAGGAGCATCCT
TTGTAACCATATCCTTTC
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