CB304766

Overview
NameCB304766
Unique NameCB304766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig355 contig Csv1_Contig355:1..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31
Identity = 64/100 (64.00%), Postives = 73/100 (73.00%), Query Frame = -2
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.756e-31
Identity = 66/122 (54.10%), Postives = 85/122 (69.67%), Query Frame = -2
Query:  302 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 667
            KG+GY+G +FHR+IK+FMIQ           G SIYG  F+DE+F ++H   G+LSMANAG +TNGSQFFI TV TPWLD RHVVFG V++G +VV  +E+V     D P+   +I+ SGEL
Sbjct:   60 KGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.756e-31
Identity = 70/125 (56.00%), Postives = 83/125 (66.40%), Query Frame = -2
Query:  290 GYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLDA 664
            GYGYKG +FHR+I  FMIQ           G SIYGS F DE+F L+H  PG+LSMANAGP++NGSQFFI TV T WLD +HVVFG V++GMDVV K+E   T+    P V   I + G L  DA
Sbjct:   75 GYGYKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCGLLSDDA 199          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.756e-31
Identity = 69/122 (56.56%), Postives = 79/122 (64.75%), Query Frame = -2
Query:  302 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 667
            KG+GYKG  FHRII  FM Q           G SIYG  FEDE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM +V  +E   +      K    I N G+L
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENGKTSK-KITIANCGQL 164          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31
Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = -2
Query:  302 YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 655
            +KG  FHRII +FMIQ           G SIYG  F DE+F  KH GPGVLSMANAGPNTNGSQFF+CTVKT WLD +HVVFG V++G+DVV+ +ES   S++  P   C I + G+L
Sbjct:   55 FKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVES-NGSQSGKPVKDCMIADCGQL 171          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31
Identity = 68/118 (57.63%), Postives = 81/118 (68.64%), Query Frame = -2
Query:  302 YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 655
            +KG  FHRII +FMIQ           G SI+G  F+DE+F  KH GPGVLSMAN G NTNGSQFF+CTVKT WLD +HVVFG VI+GMDVV+ +ES + S    P  PC I + GE+
Sbjct:   55 FKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIES-KGSEDGAPSAPCVIADCGEM 171          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.996e-31
Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = -2
Query:  302 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 667
            +G+GY  C FHR+I  FM Q           G SIYG  F+DE+F L+H G GVLSMAN+GPNTNGSQFFICT K  WLD +HVVFG V+DG +VV+K+ESV  S++   K P  I   GEL
Sbjct:   58 RGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESV-GSKSGKVKEPVTISRCGEL 178          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.996e-31
Identity = 63/100 (63.00%), Postives = 73/100 (73.00%), Query Frame = -2
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  F+DE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.996e-31
Identity = 63/100 (63.00%), Postives = 73/100 (73.00%), Query Frame = -2
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  F+DE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143          
The following BLAST results are available for this feature:
BLAST of CB304766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
PPIA_GORGO1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE1.345e-3164.00Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIB_ASPOR1.756e-3154.10Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB2_RHIOR1.756e-3156.00Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIA_RABIT1.756e-3156.56Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
CYP3_CAEEL2.294e-3157.63Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYP2_CAEEL2.294e-3157.63Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
PPIE_SCHJA2.996e-3155.74Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PPIA_PIG2.996e-3163.00Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN2.996e-3163.00Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_F04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_F04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304766 ID=CB304766; Name=CB304766; organism=Citrus sinensis; type=EST; length=668bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAATTAGCGCTCTGTTG
TATTATTGACTGTTTACTACAAGTGGAATCTGCACATATACATTCAACCG
AACAATAGTACACATTCAGCTCTACCATGAGCTTACCGAGTATTATTCTT
GAGTTTCTCAGCTAATTCAACTAAGCGGAACATGCTTTCATGTAGATAAC
AGTTACAAAAACCATTTGGCTCCACAAAAGTGATGAATTACAAAAGTCGT
ATTTTATGGTTGTGGTAAGATATCAGAGCTGGCAGATCAGGCATCTAATG
GTAGTTCTCCACTATTGATAATTCTACATGGCACCTTTGGGTAATCTGTC
CTGCTTGTCTCTACAGATTCAAGTTTCCTCACGACGTCCATTCCATCAAT
GACATGTCCAAACACAACATGGCGGTTGTCCAACCATGGTGTCTTCACTG
TGCAAATGAAAAATTGGCTCCCATTGGTATTAGGACCTGCATTGGCCATG
CTTAATACTCCAGGTCCAACATGCTTCAAGACAAAGCTCTCATCTTCAAA
GCTGGAACCATAAATACTGATGCCTCCAGTTCCATCTCCCTCAGTGAAGT
CCCCTCCCTGGATCATAAAATCTTTAATAATACGGTGGAAGGAGCATCCT
TTGTAACCATATCCTTTC
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