CB304766

Overview
NameCB304766
Unique NameCB304766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig355 contig Csv1_Contig355:1..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.996e-31
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = -2
Query:  362 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESV 667
            KGYGY G +FHR+I  FM+Q           G SIYG  F DE+F LKH  PG+LSMANAGPNTNGSQFFI TV TPWLD +HVVFG V +GMDVV+K+ES+
Sbjct:   42 KGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESL 143          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31
Identity = 63/100 (63.00%), Postives = 73/100 (73.00%), Query Frame = -2
Query:  368 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 667
            KG+GYKG  FHRII  FM Q           G SIYG  F+DE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   44 KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAME 143          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31
Identity = 72/120 (60.00%), Postives = 81/120 (67.50%), Query Frame = -2
Query:  296 YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPL 655
            YKG  FHRII  FMIQ           G SIYG  F DE+F LKH GPGVLSMAN+G +TNGSQFFI TV T WLD RHVVFG V+ GMDVV K+E+ E  ++  PK    I +SGELPL
Sbjct:   83 YKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEA-EGKQSGTPKSKVVIADSGELPL 201          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.110e-31
Identity = 68/122 (55.74%), Postives = 82/122 (67.21%), Query Frame = -2
Query:  302 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 667
            +G+GY  C FHR+I  FM Q           G SIYG  F+DE+F L+H G GVLSMAN+GPNTNGSQFFICT K  WLD +HVVFG V+DG +VV+K+ESV  S++   K P  I   GEL
Sbjct:  152 RGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESV-GSKSGKVKEPVIISRCGEL 272          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.110e-31
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = -2
Query:  305 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGE 667
            KG+G+KG SFHRII  FM Q           G SIYG  F+DE+F+LKH GPG+LSMAN+GPNTNGSQFF+   KT WLD +HVVFG V +G+DV+R++E+ + S+   PK    I + GE
Sbjct:  180 KGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEA-QGSKDGKPKQKVMIADCGE 299          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.110e-31
Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = -2
Query:  305 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGE 667
            KG+G+KG SFHRII  FM Q           G SIYG  F+DE+F+LKH GPG+LSMAN+GPNTNGSQFF+   KT WLD +HVVFG + DG+DV+R++E+ + S+   PK    I + GE
Sbjct:  180 KGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEA-QGSKDGKPKQKVIISDCGE 299          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.110e-31
Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = -2
Query:  302 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 667
            KG+GY+G +FHR+IK FMIQ           G SIYG  F DE+F L+H   G+LSMANAG +TNGSQFFI TV TPWLD RHVVFG V++G +VV ++E+V     D P    +I+ SG++
Sbjct:   76 KGFGYEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.110e-31
Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = -2
Query:  293 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLD 667
            +G GY G  FHR+I++FMIQ           G SIYG  FEDE+F L+H GPG LSMANAG +TNGSQFFI T KT WLD +HVVFG +++GMDVVR++E+      D P     I N+G +P++
Sbjct:   66 EGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAGHIPVE 190          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.110e-31
Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = -2
Query:  302 YKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 655
            +KG SFHR+I +FM Q           G SIYG+ FEDE+F  KH GPG+LSMANAG NTNGSQFFICTVKT WLD +HVVFG V++G+DVV+ +E + +S +  P  P  I + GE+
Sbjct:   56 FKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSS-SGKPTKPVVIADCGEI 172          
BLAST of CB304766 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.675e-31
Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = -2
Query:  302 KGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXGISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 667
            KG+GY+G +FHR+IK+FMIQ           G SIYG  F+DE+F LKH   G+LSMANAG +TNGSQFFI TV T WLD +HVVFG V++G +++ K+E+ +T   D P    +I  SGEL
Sbjct:   75 KGFGYEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIENSKTGAADRPVEAVKIAKSGEL 196          
The following BLAST results are available for this feature:
BLAST of CB304766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
CYPH_SCHPO2.996e-3163.73Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPIA_FELCA3.913e-3163.00Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
CP19D_ARATH3.913e-3160.00Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIE_SCHMA5.110e-3155.74Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPIE_MOUSE5.110e-3154.55Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_BOVIN5.110e-3154.55Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIB_ASPFU5.110e-3153.28Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYP6_CAEEL5.110e-3152.80Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
CP19B_ARATH5.110e-3155.93Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
PPIB_GIBZE6.675e-3153.28Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_F04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_F04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304766 ID=CB304766; Name=CB304766; organism=Citrus sinensis; type=EST; length=668bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAATTAGCGCTCTGTTG
TATTATTGACTGTTTACTACAAGTGGAATCTGCACATATACATTCAACCG
AACAATAGTACACATTCAGCTCTACCATGAGCTTACCGAGTATTATTCTT
GAGTTTCTCAGCTAATTCAACTAAGCGGAACATGCTTTCATGTAGATAAC
AGTTACAAAAACCATTTGGCTCCACAAAAGTGATGAATTACAAAAGTCGT
ATTTTATGGTTGTGGTAAGATATCAGAGCTGGCAGATCAGGCATCTAATG
GTAGTTCTCCACTATTGATAATTCTACATGGCACCTTTGGGTAATCTGTC
CTGCTTGTCTCTACAGATTCAAGTTTCCTCACGACGTCCATTCCATCAAT
GACATGTCCAAACACAACATGGCGGTTGTCCAACCATGGTGTCTTCACTG
TGCAAATGAAAAATTGGCTCCCATTGGTATTAGGACCTGCATTGGCCATG
CTTAATACTCCAGGTCCAACATGCTTCAAGACAAAGCTCTCATCTTCAAA
GCTGGAACCATAAATACTGATGCCTCCAGTTCCATCTCCCTCAGTGAAGT
CCCCTCCCTGGATCATAAAATCTTTAATAATACGGTGGAAGGAGCATCCT
TTGTAACCATATCCTTTC
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