CB304814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_PONAB (60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_HUMAN (60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_LAPHA (60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.449e-20 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_BOVIN (60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.893e-20 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_RAT (60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR + R+G+ +K FVR +IREV FAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_DANRE (60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.194e-20 Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK P+ + R+G+ +K F R +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHKVTKNVSKPKHSRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNTLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_CHICK (60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.194e-20 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KG+ VTK PR R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_ICTPU (60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20 Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 235 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFN---ALRKSRA 495 KGH VTK P+ + R G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N A+RK+ A Sbjct: 13 KGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNILAAMRKAAA 102
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_CAEEL (60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36 PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.039e-18 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH T+ + R KG SK+ VR ++RE+ GFAPYE+R+ E+ R+ KDKRALK KR++GTH+RAK KREE+ N + R Sbjct: 15 KGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQR 100
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_MOUSE (60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18 Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = -3 Query: 250 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNAL 495 KGH VTK PR + R+ + + FVR +IREV GFAPYE+R EL +V K KRALK K+++GTH RAK+KREE+ N L Sbjct: 13 KGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRAKRKREELSNVL 94 The following BLAST results are available for this feature:
BLAST of CB304814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304814 ID=CB304814; Name=CB304814; organism=Citrus sinensis; type=EST; length=593bpback to top |