CB304826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 4.513e-19 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ+T N NY AG+AIG D LN+P+ VA D +SFKTA WFWMT H+V+ G+ E ING ECG D+V DR+ Y YC GV G L+C Sbjct: 189 RGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDC 311
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 5.894e-19 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY + GRAIG D LN+P+ VA D VISFKTALWFWMT H V+ G+ ING ECG +V DR+ Y YC FG+ G L+C Sbjct: 179 RGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDC 301
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.698e-19 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 181 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.698e-19 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 181 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.005e-18 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 185 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDC 307
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.005e-18 Identity = 54/123 (43.90%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALWFWMT H V+ GF ING ECG +V DR+ Y YC GV PG L+C Sbjct: 187 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 309
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.005e-18 Identity = 52/123 (42.28%), Postives = 64/123 (52.03%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D +ISFK+A+WFWMT H V+ GF ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 179 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 301
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.005e-18 Identity = 54/123 (43.90%), Postives = 63/123 (51.22%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALWFWMT H V+ GF ING ECG +V DR+ Y YC GV PG L+C Sbjct: 192 RGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 314
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 1.313e-18 Identity = 52/123 (42.28%), Postives = 65/123 (52.85%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL+ N NY GRAIG D LN+P+ VA D VI+FK A+WFWMT H+V+ G+ ING ECG +V DR+ Y YC FGV+PG L+C Sbjct: 198 RGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC 320
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.715e-18 Identity = 52/123 (42.28%), Postives = 62/123 (50.41%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQLTG NY AG+AIG D +N+P+ VA D +SFKTA+WFWMT H V+ G+ ING ECG QV DR+ Y YC V PG L+C Sbjct: 116 RGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDC 238 The following BLAST results are available for this feature:
BLAST of CB304826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304826 ID=CB304826; Name=CB304826; organism=Citrus sinensis; type=EST; length=467bpback to top |