CB304826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.343e-12 Identity = 41/108 (37.96%), Postives = 51/108 (47.22%), Query Frame = -3 Query: 205 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSVLN---------------QGFSETIRKINGPAECGGRNRDQVLDRVRRYTD 465 RGPIQ++ N NY AG+AIG D L +P+ V D + FKTALWFWMT H V+ G+ I+G ECG V DR+ Y D Sbjct: 82 RGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD 189
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.114e-12 Identity = 43/124 (34.68%), Postives = 54/124 (43.55%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWMT-------YVHSVL---------------NQGFSETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGP+QL N NY E G +G + L+ PE VA D V+SF+ ALWFWM H V+ GF I EC + + +R+ Y YC VDPG L C Sbjct: 175 RGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYC 298
BLAST of CB304826 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11 Identity = 46/124 (37.10%), Postives = 54/124 (43.55%), Query Frame = -3 Query: 160 RGPIQLTGNGNYIEAGRAIGFDGLNSPETVARDRVISFKTALWFWM------TYVHSVLN---------------QGFSETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGSRLEC 465 RGPIQL+ N NY G + L PE V D VISFKTA+WFWM H+V+ G+ ING ECG G DR+ Y YC G GS L+C Sbjct: 200 RGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDC 323 The following BLAST results are available for this feature:
BLAST of CB304826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304826 ID=CB304826; Name=CB304826; organism=Citrus sinensis; type=EST; length=467bpback to top |