CB304830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.468e-32 Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.468e-32 Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.468e-32 Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.468e-32 Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 4.468e-32 Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL++ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 7.621e-32 Identity = 65/118 (55.08%), Postives = 97/118 (82.20%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNI---KEGQTIVVGGASEANTKKPCC 567 +F+NV RWL+ELRDHADS+IVIMM+GNK+DL HLRAV+ ++ ++ AE+EGL F+ETSA+EA+NVE+AFQTI++E+Y I+++K+L++ E A ++ +G+TI + A+ NTK+ CC Sbjct: 99 SFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISIDSAA-GNTKRACC 215
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 9.953e-32 Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLS---SGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+ENV RWLKELRDHADSNIVIM++GNK+DL+HLRAV T++A+++AE+ GLSFIETSAL+ NVE AFQTIL+EIYRI+S+K +S + +PSN I V +E K CC Sbjct: 98 TYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN--NVVPIHVPPTTENKPKVQCC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.217e-31 Identity = 65/115 (56.52%), Postives = 85/115 (73.91%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 TFENV RWLKEL++H D NIV+M++GNK+DL+HL AV TED +SYAE+E L F+ETSALEA NVE AF +L++IYRI SKK + +GE +++ +G+ I V A K CC Sbjct: 100 TFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVKNDVSALKKLGCC 214
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.100e-30 Identity = 68/120 (56.67%), Postives = 93/120 (77.50%), Query Frame = -3 Query: 223 TTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTI-VVGGASEANTKK---PCC 570 ++F+NV RWLKELR+HADSNIVIM++GNKTDL HLRAV+TE+AQ++A LSFIETSA++A NVE+AFQT+L+EI+RI+S +SL +G+ + GQT+ + ++ N KK CC Sbjct: 96 SSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG-VHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.100e-30 Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN--IKEGQTIVVGGASEANTKKPCC 567 TFEN +RWLKELRDH D NIV+M+IGNK+DL+HL AV TED +S+AERE L F+ETSALEA NVE AF +L++IYRI+SK+++ +G+ S+ +GQTI V S + CC Sbjct: 100 TFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCC 216 The following BLAST results are available for this feature:
BLAST of CB304830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304830 ID=CB304830; Name=CB304830; organism=Citrus sinensis; type=EST; length=575bpback to top |