CB304830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 +FEN+S+WL+ + HA+ ++ M++ NK D+ H R V + A + F ETSA IN+EKAF T+ +I R K EP N+ + G K CC Sbjct: 96 SFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVK-----EPNSENVD-----ISSGGGVTGWKSKCC 200
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 +FEN+S+WL+ + +HA+ ++ M++GNK D++ R V + A + F ETSA IN+EKAF T+ +I + K EP N+ T GG + K CC Sbjct: 96 SFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVK-----EPDRENVDISTT---GGGTGL---KKCC 199
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = -3 Query: 343 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 567 TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YA+ L F+ETSA A+NV + F I ++ Sbjct: 108 TFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = -3 Query: 343 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 567 TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YA+ L F+ETSA A+NV + F I ++ Sbjct: 108 TFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB5C_CANFA (Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = -3 Query: 343 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEI 567 TF W+KEL+ A NIVI + GNK DL RAV ++AQ+YA+ L F+ETSA A+NV + F I ++ Sbjct: 108 TFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 34/89 (38.20%), Postives = 57/89 (64.04%), Query Frame = -3 Query: 304 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIY-RIISKKSLSSGE 567 +FE+++ WL + R + ++ ++IGNK DL+ R V+T +A+ +AE+ GL F ETSA A+NV++AF+ +I ++ S L S E Sbjct: 111 SFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNE 199
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11 Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKP---CC 567 +F+ +S W+ E+R + NIVI +IGNK D K R + TE+ A+ + F ETSA + +VE F + ++ +I + +L+ P Q+I +G ++ KKP CC Sbjct: 92 SFQYLSGWMDEVRQMSSPNIVIALIGNKCDCKDKRVITTEEGAKNAKENDILFFETSAKDYESVESVFDGVSKKVLSLIKQGTLTVVNKKP------QSIQLGAPTQETPKKPKSECC 203
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 235 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 567 +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 98 SFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 235 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 567 +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 98 SFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 235 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 567 +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 98 SFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191 The following BLAST results are available for this feature:
BLAST of CB304830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304830 ID=CB304830; Name=CB304830; organism=Citrus sinensis; type=EST; length=575bpback to top |