CB304830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.676e-28 Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 214 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL------SSGEPAPSNIKEGQTIVVGGASEANTKKPCCFSS 567 TF+++ RWL+ELR HAD NIVIM+IGNKTDL+ RAV TEDA+ +A++EGL F+ETSA+EA N+E AF T+L+EI+ I++KK+L S+G PA G+ I+V G + +K C SS Sbjct: 102 TFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLT---GKKILVPGPGQVIPEKKACCSS 222
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.139e-27 Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL----SSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 TF+++ RWL+ELR+HAD NIVI++IGNK DL + R V TEDA+ +AE+EGL F+ETSALEA NVE AF T+L+EIY I++KKSL S G +++ + I+ G A E K+ C Sbjct: 104 TFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMC 222
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27 Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 TFEN +RWL+ELR H D NIV+M+IGNK DL+HL AV TE+A+++AERE L F+ETSAL+A NVE AF +L++I++I+SK+S+ G + +G+TI V + CC Sbjct: 100 TFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCC 214
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.259e-26 Identity = 60/121 (49.59%), Postives = 86/121 (71.07%), Query Frame = -3 Query: 217 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE----PAPSNIKEGQTIVVGGASEANTKKPCCFS 567 TF+++ RWL+ELR HAD NIVIM+ GNKTDL+ RAV TEDA+ +A++EGL F+ETSA+EA +E AF T+L+EI+ I++KK+L++ E P+++ + +V G KK CC S Sbjct: 102 TFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.639e-24 Identity = 55/115 (47.83%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 223 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 567 T+++V RW+ ELR++AD NI IM++GNK+DL+HLR V+T++A+ ++E+ L+FIETSAL++ NVE AFQ IL++IY I+S+ S S+G P + +TI++ SE K C Sbjct: 100 TYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG-PQTTIDSNTETIILPTTSEPPAAKSGC 213
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.150e-22 Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = -3 Query: 217 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCFS 567 T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A +AE GL F+ETSAL++ NVE AFQT+L EI+ +SK+ +S + + Q G E K+ CC S Sbjct: 99 TYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAITLGNAQAGQDPGPGE---KRACCIS 212
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.080e-21 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = -3 Query: 217 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCFS 567 T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ +S + Q G E K+ CC S Sbjct: 99 TYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAITLGSAQAGQEPGPGE---KRACCIS 212
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.548e-21 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = -3 Query: 217 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCFS 567 T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ ++ + G G E K+ CC S Sbjct: 99 TYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGSGPAGQELGPGE---KRACCIS 212
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.548e-21 Identity = 51/116 (43.97%), Postives = 75/116 (64.66%), Query Frame = -3 Query: 223 TTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 570 +TFENV RWL EL H+D+ + M+IGNK DL+ +RAV+ E+ +S AE EGL F+ETSAL++ NV+ AF+ ++ EIY IS+K L+S + + + +V +E CC Sbjct: 98 STFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNS-DSYKEELTVNRVSLVKNENEGTKTFSCC 212
BLAST of CB304830 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = -3 Query: 217 TFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCFS 567 T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ +S P + I G + G K+ CC + Sbjct: 99 TYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNS--PRSNAIALG-SAQAGQEPGPGQKRACCIN 212 The following BLAST results are available for this feature:
BLAST of CB304830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304830 ID=CB304830; Name=CB304830; organism=Citrus sinensis; type=EST; length=575bpback to top |