CB304834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31 Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + DK +E +GA IV+ +L +P IA NA K + G+NA T Y +M AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31 Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + D +E +GA IV+ +L AP IA NA K + G+NA T +Y +M AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADATLSGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + +E +GA IV+ AL +P IA NA K GYNA T +Y +ML AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALGDWSSSNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_LACAC (60 kDa chaperonin OS=Lactobacillus acidophilus GN=groL PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31 Identity = 78/143 (54.55%), Postives = 97/143 (67.83%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL++R+ RIEDA N+T AA++EG V GGG ALV D AIKD K E +DE+ G IV +AL AP IA NA + E GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++L T+A+ Sbjct: 379 VGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALV---DVEKAIKDLKGETSDEQTGINIVLRALSAPVRQIAENAGKDGAVVLNKLESQENEIGYNAATDKWENMVEAGIIDPTKVTRTALQNAASIAALLLTTEAV 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31 Identity = 72/142 (50.70%), Postives = 98/142 (69.01%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA NAT AA+EEGIVPGGG ALV D V K ++++GA +V +AL AP +IA+NA K++E + GYNA TD YE++++AGVIDP KV R ALQNA S+AG++L T+A+ Sbjct: 380 VGAATEVEMKEKKARVEDALNATRAAVEEGIVPGGGVALVRAIDAVAKAKIT---GEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEGSFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAM 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_PHATR (60 kDa chaperonin, chloroplastic OS=Phaeodactylum tricornutum GN=groL PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 72/143 (50.35%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDH-VPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG TETE++D+KLR+EDA NAT AA+EEGIVPGGGA L HLS++ V K+ L++ DE +GA I+ +A++AP IA NA + E+ GYNA + + NM G++DPAKVTR LQNA S+A M+L T+ I Sbjct: 381 VGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATLTHLSENLVTWAKNNLKE-DELIGAMIISRAILAPLRRIAENAGINGPVIIEKVQQQEFEIGYNAAKNTFGNMYTEGIVDPAKVTRSGLQNATSIASMILTTECI 522
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH603_ANAVT (60 kDa chaperonin 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL3 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 72/143 (50.35%), Postives = 97/143 (67.83%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPA-IKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL+DRKLR+EDA NAT AA+EEGIVPGGG + H++ + K +++D +E G IV +AL AP IA NA ++ + GY+A+ +K+ NM +AG++DPAKVTR ALQNAAS+ GMVL T+ + Sbjct: 379 VGAATETELKDRKLRLEDAINATKAAVEEGIVPGGGTTIAHIAPQLEEWAKSQMKD-EELTGTMIVARALYAPLRRIADNAGANGAVIVERVRELPFDEGYDAVANKFVNMFEAGIVDPAKVTRSALQNAASIGGMVLTTEGV 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_SYNS3 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9311) GN=groL2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L H++ + +E +GA IV AL AP IA NA K + GYNA +Y +ML AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHMAPALEEWAASNLSGEELIGANIVASALTAPLMRIAENAGVNGAVVAENVKSKSFNEGYNAANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 75/142 (52.82%), Postives = 91/142 (64.08%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E +GA IV AL AP IA NA K + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPSLEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISEGYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31 Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E +GA IV+ +L AP IA NA K + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLAADLQKWANSNLSGEELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520 The following BLAST results are available for this feature:
BLAST of CB304834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304834 ID=CB304834; Name=CB304834; organism=Citrus sinensis; type=EST; length=636bpback to top |